Transcript Information: S_Transcript_127798.p1


Annotated TAIR IDAT2G36240.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15195663-15197156 | Forward length=497
E-Value7.9E-174
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.603714638623
Replicate 211.166473082171
Replicate 38.8826239096525
Condition 2: 8 Hour
Replicate 113.056361418653
Replicate 211.003296984029
Replicate 310.962435911133
Condition 3: 24 Hour
Replicate 112.61653475069
Replicate 211.100642404742
Replicate 39.1622936818585


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_127798.p1 GENE.S_Transcript_127798~~S_Transcript_127798.p1 ORF type:complete len:490 (+),score=87.10,PPR_2|PF13041.2|35,PPR_2|PF13041.2|7.7e-15,PPR_2|PF13041.2|2.3e-16,PPR_2|PF13041.2|1.1e-12,PPR_2|PF13041.2|0.00068,PPR_2|PF13041.2|41,PPR_2|PF13041.2|2.7e-06,PPR_2|PF13041.2|2.6e-08,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|7.6e-05,PPR_1|PF12854.3|3.1e-09,PPR_1|PF12854.3|1.4e-07,PPR_1|PF12854.3|2.1e-06,PPR_1|PF12854.3|0.098,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.1e-08,PPR_1|PF12854.3|8.3e+02,PPR|PF01535.16|0.59,PPR|PF01535.16|5.9e-06,PPR|PF01535.16|3.1e-08,PPR|PF01535.16|2.5e-05,PPR|PF01535.16|0.006,PPR|PF01535.16|26,PPR|PF01535.16|0.00064,PPR|PF01535.16|27,PPR|PF01535.16|0.00033,PPR|PF01535.16|2e+03,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|43,PPR_3|PF13812.2|0.001,PPR_3|PF13812.2|3.4e-06,PPR_3|PF13812.2|3,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|4.5e+02,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|0.56,PPR_3|PF13812.2|3.9e+03,MRP-S27|PF10037.5|0.031,MRP-S27|PF10037.5|2.2e+02,MRP-S27|PF10037.5|15,MRP-S27|PF10037.5|11 S_Transcript_127798:1088-2557(+)
ATGAAAGGAACAACTACCAAATTGGCGATGAGAAAACTCCCAGCACCTCATGTGAAGCATCTTCAACCAGCAACAACTGGGGTGACTCCTACCCCAACTTCGTTACCTGAAGCCTTGCCAGCTCCACTGCCTACACTCTCTCTGGCCTCGTCAGCCACACAAACCCAGCTCCTAACATTCCTCAAAGTCCACCTTAAACCTCCAATCACCCCCCAAAACCTTCTCCACTTTCTCAAGAACAAGCTCCATTACCATCCTAAGTTTACCCACCTTGACTTTCACATCTTTCAGTGGGCCACCAACATTGACTCTTACCGCCATGATCATCACATCTATGAATGGATGGTCAGAACCCTTGCCATTTCAGACCGCTTTGATGCTCTTTGTACAGTGTTCCTGGAAAGTGTGCCTTCTAATCCATGCCCCTGCTCTGATGGCATCTTTTGCTGTCCAAGGATTGAACCCATCTATAGATTTGCCATCAATTCTTTTTGCAGAGCAGGGAGACTGGGTGATTCTTTGACTGCTTTTGATACTATGCGGAAATTGATTGATGGGAGACCCAGTGTTGCTCTTTATAATATTTTGATTCATGGATTTGTGAAGAATGGTCAACATGACAGGGCATTGAGCTTGTATGATAGGCTTATTGTGGACAGAGTTAAGCCAGATGTGTTTACATTCAATATATTGATCAGTAGCTACTGTAGGAATTCAAGTTTTTGTTTGGCTTTGGAAATTTTCAAGGAGATGAGGGCTAAGGGGTGCGAGCCTAATGTGGTTAGTTTCAATACTTTGATTAAAGGTTTCTTTAGGGAGAAGAAGTTTGAGGAAGGGATTTCCATGGCTTACGAGATGATAGAGCTAGGCTGTCAAATCACATGCGTGACATGTGAGATTTTGATCAATGGGCTTTGTAAAGTTGGGAGAATGTTGAGAGCTTGTGGGCTGTTGATCGATCTTGCAAGGAAAGGGTTTTTGCCAGATGGGTTTGATTGTTCTGACATTGTGGAGAGGCTTTGCAGTGGTTCAAATGTAAATGGAGCATTAGAGGTTGTAGAGGAGATGTGGAAGGCAGGGAAAGCTCCAGGCTTAATTGCTTGTATCACTTTGGTAGATTGCTTGAGGAAAGCTGGAAATGTAATAGAGGCTCTGAGATTGGTGGATAAGATGTTAAAAGAGGGTATTCTATTGGATAGTGTGACCTTTAATTGTCTTCTTCAAGATGCTAGTCGTATGGGAAAAACTACCGAGGCTGATAGACTGAGGTTATTGGCTTCCAGCAAGGGTTTGCATCCTGATGTGATGACCTATAATATATTGGTTGAGGGCTACACGCGGGAAGGTAAAAGAAAGGAGGGTGAGCGCTTGGTTGAGGAGATGCTCGATAAAGAATATATTCATGATATTGCCTCCTACAACAGATTGATGGACGGGCTTCGAACTTGTTCTGTTTCTGGACAAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_127798.p1 GENE.S_Transcript_127798~~S_Transcript_127798.p1 ORF type:complete len:490 (+),score=87.10,PPR_2|PF13041.2|35,PPR_2|PF13041.2|7.7e-15,PPR_2|PF13041.2|2.3e-16,PPR_2|PF13041.2|1.1e-12,PPR_2|PF13041.2|0.00068,PPR_2|PF13041.2|41,PPR_2|PF13041.2|2.7e-06,PPR_2|PF13041.2|2.6e-08,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|7.6e-05,PPR_1|PF12854.3|3.1e-09,PPR_1|PF12854.3|1.4e-07,PPR_1|PF12854.3|2.1e-06,PPR_1|PF12854.3|0.098,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.1e-08,PPR_1|PF12854.3|8.3e+02,PPR|PF01535.16|0.59,PPR|PF01535.16|5.9e-06,PPR|PF01535.16|3.1e-08,PPR|PF01535.16|2.5e-05,PPR|PF01535.16|0.006,PPR|PF01535.16|26,PPR|PF01535.16|0.00064,PPR|PF01535.16|27,PPR|PF01535.16|0.00033,PPR|PF01535.16|2e+03,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|43,PPR_3|PF13812.2|0.001,PPR_3|PF13812.2|3.4e-06,PPR_3|PF13812.2|3,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|4.5e+02,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|0.56,PPR_3|PF13812.2|3.9e+03,MRP-S27|PF10037.5|0.031,MRP-S27|PF10037.5|2.2e+02,MRP-S27|PF10037.5|15,MRP-S27|PF10037.5|11 S_Transcript_127798:1088-2557(+)
MKGTTTKLAMRKLPAPHVKHLQPATTGVTPTPTSLPEALPAPLPTLSLASSATQTQLLTFLKVHLKPPITPQNLLHFLKNKLHYHPKFTHLDFHIFQWATNIDSYRHDHHIYEWMVRTLAISDRFDALCTVFLESVPSNPCPCSDGIFCCPRIEPIYRFAINSFCRAGRLGDSLTAFDTMRKLIDGRPSVALYNILIHGFVKNGQHDRALSLYDRLIVDRVKPDVFTFNILISSYCRNSSFCLALEIFKEMRAKGCEPNVVSFNTLIKGFFREKKFEEGISMAYEMIELGCQITCVTCEILINGLCKVGRMLRACGLLIDLARKGFLPDGFDCSDIVERLCSGSNVNGALEVVEEMWKAGKAPGLIACITLVDCLRKAGNVIEALRLVDKMLKEGILLDSVTFNCLLQDASRMGKTTEADRLRLLASSKGLHPDVMTYNILVEGYTREGKRKEGERLVEEMLDKEYIHDIASYNRLMDGLRTCSVSGQS*

Click here to download the sequence:
Link to NCBI Protein BLAST