Transcript Information: S_Transcript_127989.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value5E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1836308705789
Replicate 21.6971376582704
Replicate 30.94578133762054
Condition 2: 8 Hour
Replicate 10.87488780788238
Replicate 21.8356388627468
Replicate 31.4210565069988
Condition 3: 24 Hour
Replicate 11.0082253918736
Replicate 22.2082688202595
Replicate 31.6814696270077


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_127989.p1 GENE.S_Transcript_127989~~S_Transcript_127989.p1 ORF type:complete len:195 (-),score=13.32,zf-RVT|PF13966.2|6.9e-07,zf-RVT|PF13966.2|2.8e+03,zf-RVT|PF13966.2|3.3e+03 S_Transcript_127989:916-1500(-)
ATGATTTTGCGACAGAGACGGAGGCCTTACTGTTGTCTTTCTCCGGATGTGTGCTTTATGTGCGGGGAGAGTGGGGAGACGGCCACTCATCTGTTCCTCCATTGTCCAGTTGCTCGAGTCTTGTGGGCTTCGTTGTTTGGAGTGCGTGGGGAAGCCCTAGTATGTCCGTCCACTGTAGCAGCGTTCCTTCAGATCCGCTTCTCGGGGTTTGGTCAGAATAAGGAGCTGGGTATGTTATGGCGTAATGCGGTTTTTGCTATCCTGTGGTGTGTTTGGTTGGAAAGGAATGCTAGAGTGTTCAAGCAGGTTGCTCTTCCTCCTCCCCTCCTTTGGGAGCGCATCACCTTTTTGGCCTCCCTTTGGAGTAAGGTTGGTGGGGCCTTCCGTAGTTATTCTATTACTGTAATTCAATGCAATTGGCGAACTTGTAATCGGGAGGACATCTTGTCCTTCCATAATTCTCCCAACTTAAATATTTTTGTCCAACTAAAACACCAAATATTTCAGGCAATTCAAGCAAAAGCCCTATGTTTCTTTTATCTGAAAAAAGAAGAATTCTTTGACCTTACATTATATGCAGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_127989.p1 GENE.S_Transcript_127989~~S_Transcript_127989.p1 ORF type:complete len:195 (-),score=13.32,zf-RVT|PF13966.2|6.9e-07,zf-RVT|PF13966.2|2.8e+03,zf-RVT|PF13966.2|3.3e+03 S_Transcript_127989:916-1500(-)
MILRQRRRPYCCLSPDVCFMCGESGETATHLFLHCPVARVLWASLFGVRGEALVCPSTVAAFLQIRFSGFGQNKELGMLWRNAVFAILWCVWLERNARVFKQVALPPPLLWERITFLASLWSKVGGAFRSYSITVIQCNWRTCNREDILSFHNSPNLNIFVQLKHQIFQAIQAKALCFFYLKKEEFFDLTLYAV*

Click here to download the sequence:
Link to NCBI Protein BLAST