Transcript Information: S_Transcript_12827.p1


Annotated TAIR IDAT5G13600.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4380432-4382497 | Forward length=591
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3923385319796
Replicate 24.6504899557507
Replicate 33.9778450376393
Condition 2: 8 Hour
Replicate 13.0315505842983
Replicate 23.0706458917272
Replicate 32.6122362261007
Condition 3: 24 Hour
Replicate 14.8187242993958
Replicate 25.1104673162352
Replicate 36.6764235190013


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12827.p1 GENE.S_Transcript_12827~~S_Transcript_12827.p1 ORF type:complete len:204 (+),score=24.63,NPH3|PF03000.10|3.8e-06 S_Transcript_12827:1237-1848(+)
ATGACAAACAAGGTTGGTCTTGGGCATGAGAAAGCTGCTATGCTAGGGAGAAGAAGTTATGATAAAAGAACTTTAAATGTAGGGTCGATATCTGGGTATAGGCATAACCGTTGTGTGATCGTTCCACCTAAAGTGGATATGATTGCAGAAGCCATAGAAAGAAAAGATAACAACTGGTTTGTACGAACAAAAGTGGCATGTGATTTAGTCATACGCGTCGGAAACACTAGCAGTTTTCACCTGCATATTGCACATCCAAACTTGACAGAGGAGGAGAGAAAGGAGGTATGCAGCGCCATGGAGTACCACAAGCTATCACAAGAAGCACGCGAACACGCAATGAAGAATGATAGGCTGCCAGAGAACATCACCACACAATTTATTCTTCTTGAGCAAGTGAACATGGTGAATTCAATGGTGGACGGAAGTTCGATTTATCGAAGAACAAAAGGGCAGACGATTATCAACTTCAACAGCAATTCACGTAGGGAGTGCATGAAGGTTCACAAACAGATTAGGATGATGAAACAAGAGTTTGAGGTTATAAAGGTGGACCTCAATAAGTTGCAATCCTTCAAAGTAGAGCTTAAAAGGTTGGCTAAGAGGGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12827.p1 GENE.S_Transcript_12827~~S_Transcript_12827.p1 ORF type:complete len:204 (+),score=24.63,NPH3|PF03000.10|3.8e-06 S_Transcript_12827:1237-1848(+)
MTNKVGLGHEKAAMLGRRSYDKRTLNVGSISGYRHNRCVIVPPKVDMIAEAIERKDNNWFVRTKVACDLVIRVGNTSSFHLHIAHPNLTEEERKEVCSAMEYHKLSQEAREHAMKNDRLPENITTQFILLEQVNMVNSMVDGSSIYRRTKGQTIINFNSNSRRECMKVHKQIRMMKQEFEVIKVDLNKLQSFKVELKRLAKRV*

Click here to download the sequence:
Link to NCBI Protein BLAST