Transcript Information: S_Transcript_12829.p1


Annotated TAIR IDAT5G64330.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)NPH3, RPT3, JK218
Annotation TypeHomolog
Chromosome Positionchr5:25727568-25730225 | Forward length=746
E-Value2E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3765345466473
Replicate 22.1555598992974
Replicate 32.9677966111541
Condition 2: 8 Hour
Replicate 11.4707165735954
Replicate 21.4143122703275
Replicate 31.22504871293
Condition 3: 24 Hour
Replicate 14.7707216818539
Replicate 23.5167983480539
Replicate 32.1743141728548


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12829.p1 GENE.S_Transcript_12829~~S_Transcript_12829.p1 ORF type:3prime_partial len:174 (+),score=14.08 S_Transcript_12829:1237-1755(+)
ATGACAAACAAGGTTGGTCTTGGGCATGAGAAAGCTGCTATGCTAGGGAGAAGAAGTTATGATAAAAGAACTTTAAATGTAGGGTCGATATCTGGGTATAGGCATAACCGTTGTGTGATCGTTCCACCTAAAGTGGATATGATTGCAGAAGCCATAGAAAGAAAAGATAACAACTGGTTTGTACGAACAAAAGTGGCATGTGATTTAGTCATACGCGTCGGAAACACTAGCAGTTTTCACCTGCATATTAACATTCACCTGGACGGCCTTCCAGGTGAAGCAGAGATCTTTGAGTTAATAGTCAAGTTCTGTTATGGGTGGAAGGTTGATCTGACTGCCAACAATGCCGCGCCATGGTACTGTGCGGCCAACTTCTTGGAAATGAGTGATGACTTGGTATTTGGGAACCTCATCTCAAGGACAGAATCTTTCTTGAGCTTTGTAGTATTCTCTTCCTGGAAGGACACTTTCCATGTTCTAAAAACCTGTGAACCAAGCTCGACTTGGGCCAGAGATTTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12829.p1 GENE.S_Transcript_12829~~S_Transcript_12829.p1 ORF type:3prime_partial len:174 (+),score=14.08 S_Transcript_12829:1237-1755(+)
MTNKVGLGHEKAAMLGRRSYDKRTLNVGSISGYRHNRCVIVPPKVDMIAEAIERKDNNWFVRTKVACDLVIRVGNTSSFHLHINIHLDGLPGEAEIFELIVKFCYGWKVDLTANNAAPWYCAANFLEMSDDLVFGNLISRTESFLSFVVFSSWKDTFHVLKTCEPSSTWARDL

Click here to download the sequence:
Link to NCBI Protein BLAST