Transcript Information: S_Transcript_12836.p1


Annotated TAIR IDAT5G54270.1
Annotated Gene Namelight-harvesting chlorophyll B-binding protein 3
Annotated Gene Symbol(s)LHCB3, LHCB3*1
Annotation TypeOrtholog
Chromosome Positionchr5:22038424-22039383 | Forward length=265
E-Value7.2E-163
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11380.1370475269
Replicate 21631.1877304259
Replicate 31949.6715587882
Condition 2: 8 Hour
Replicate 11082.4838622135
Replicate 2990.55519906889
Replicate 31039.5439398099
Condition 3: 24 Hour
Replicate 11625.9092621181
Replicate 21599.6717584115
Replicate 31633.3879335412


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12836.p1 GENE.S_Transcript_12836~~S_Transcript_12836.p1 ORF type:3prime_partial len:242 (+),score=46.26,Chloroa_b-bind|PF00504.17|1.9e-50 S_Transcript_12836:119-841(+)
ATGGCCACTATGTTAAGCTCCGGCACTGTTCTTAGACCAACCCCATTTTTAGGCCAAGGTAAAGGAATTAACGGCAACGCTCTTAGAGATGTTGTTCCTATGGGCTCTGGCAAATTCACCATGGGGAATGAATTGTGGTATGGACCAGACAGGGTGAAATATTTGGGACCTTTTTCTGCACAAACCCCTTCTTACTTGACTGGTGAATTTCCTGGTGATTATGGGTGGGACACTGCTGGACTATCTGCTGATCCTGAGGCTTTTGCTCGTAATAGGGCTCTCGAGGTCATCCATGGAAGATGGGCAATGCTTGGAGCACTAGGCTGCATCACTCCTGAAGTATTGGAGAAATGGGTTAGGGTTGACTTCAAGGAACCAGTTTGGTTCAAGGCCGGGGCCCAAATCTTCTCCGAGGGTGGGCTGGACTACTTAGGCAACCCAAATCTGGTCCATGCCCAAAGTATCCTAGCTGTGTTGGGCTTCCAGGTGGTGCTAATGGGCCTTGTCGAGAGCTTCCGCATCAACGGGTTGGAAGGAGTTGGGGAAGGCAACAACCTCTACCCAGGAGGCCAATACTTTGACCCGTTGGGCTTAGCCGATGACCCGGTCACCTTCGCCGAGCTCAAGGTGAAGGAGATCAAGAATGGAAGGCTAGCCATGTTCTCCATGTTTGGTTTCTTTGTGCAGGCTATTGTCACTGGAAAAGGGCCCTTGGAGAACCTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12836.p1 GENE.S_Transcript_12836~~S_Transcript_12836.p1 ORF type:3prime_partial len:242 (+),score=46.26,Chloroa_b-bind|PF00504.17|1.9e-50 S_Transcript_12836:119-841(+)
MATMLSSGTVLRPTPFLGQGKGINGNALRDVVPMGSGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVESFRINGLEGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL

Click here to download the sequence:
Link to NCBI Protein BLAST