Transcript Information: S_Transcript_12843.p1


Annotated TAIR IDAT5G54270.1
Annotated Gene Namelight-harvesting chlorophyll B-binding protein 3
Annotated Gene Symbol(s)LHCB3, LHCB3*1
Annotation TypeOrtholog
Chromosome Positionchr5:22038424-22039383 | Forward length=265
E-Value9.1E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1674.73915376543
Replicate 2645.67429031584
Replicate 3737.20760018528
Condition 2: 8 Hour
Replicate 1274.03851910928
Replicate 2292.35592678173
Replicate 3325.10292741747
Condition 3: 24 Hour
Replicate 1648.21348153722
Replicate 2775.50321244236
Replicate 3727.14982441416


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12843.p1 GENE.S_Transcript_12843~~S_Transcript_12843.p1 ORF type:5prime_partial len:147 (-),score=26.51,Chloroa_b-bind|PF00504.17|5.5e-24 S_Transcript_12843:225-665(-)
GTCAGGGTAGACTTCAAGGAACCAGTTTGGTTCAAGGCCGGGGCCCAAATCTTCTCCGAGGGTGGGCTGGACTACTTAGGCAACCCAAACCTGGTTCATGCACAAAGCATATTAGCTGTGTTGGGCTTACAGGTGGTGCTAATGGGCCTTGTCGAGAGCTTCCGCATCAACGGGTTGGAAGGAGTTGGGGAAGGCAACAACCTCTACCCAGGAGGCCAATACTTTGACCCATTGGGCTTAGCCGATGACCCGGTCACCTTCGCCGAGCTCAAGGTGAAGGAGATCAAGAATGGAAGGCTAGCCATGTTCTCCATGTTTGGTTTCTTTGTGCAGGCTATTGTCACTGGAAAAGGTCCATTGGAGAACCTCTTGGACCACCTTGATAACCCAGTGGCTAACAATGCCTGGGTTTATGCCACCAAGTTTGCGCCTGGTTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12843.p1 GENE.S_Transcript_12843~~S_Transcript_12843.p1 ORF type:5prime_partial len:147 (-),score=26.51,Chloroa_b-bind|PF00504.17|5.5e-24 S_Transcript_12843:225-665(-)
VRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGLQVVLMGLVESFRINGLEGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS*

Click here to download the sequence:
Link to NCBI Protein BLAST