Transcript Information: S_Transcript_12853.p1


Annotated TAIR IDAT1G56180.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27290.1); Has 436 Blast hits to 436 proteins in 83 species: Archae - 0; Bacteria - 153; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21026243-21028047 | Reverse length=389
E-Value1.8E-179
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.9986407054207
Replicate 28.4653389189505
Replicate 310.216479700987
Condition 2: 8 Hour
Replicate 111.148525393609
Replicate 210.783552941451
Replicate 38.8943824538771
Condition 3: 24 Hour
Replicate 110.110461663512
Replicate 210.924283277808
Replicate 311.008182450195


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12853.p1 GENE.S_Transcript_12853~~S_Transcript_12853.p1 ORF type:complete len:417 (+),score=77.90 S_Transcript_12853:100-1251(+)
ATGGCACTCTCCTTCCTGCCTGCACACCTCTCAGGTACCCCTTTATATCTCTCCCCGAAGTCTCTCACTTGCCCATATGGGCAGATTAAATTAATCAATACAACCCGGCATACATACTTGGTTCGAGCTGTTAGAGAGTGGAAAGAATATGAAGAAGCAGTGAAAGACAAGGACCTTGCCAGAGCGCTCAGGTTCTTGAAGACAATTAATGGTGATGGGGTTCAAGTTCAACCGACTGAGTCAACTCGTTCTGATTTGGGGTTGCCTTTTTTGGGGAGAGATTGGGAGGTTCTTGATACTTGTTTGAATGCCAATGATATGAGGCTTGTGGGCAGTGCTTATGCCTTTCTTAAGGATAGAGGGTTGTTGCCTAATTTTGGCAAGTATAGAAATATTGTTTTGGAAGGACCACGAGATGTCACGCCTACAATCTTGAAGTCTTCAACTGGCTTGGAAGTGTCTAAACTTTCGCCAAAGAAGTGGGGTGTTTCTGGAACTTCCAGTGCTGTTTTGTTTGCCTTTCTTGGTGGTGTATCATTTCTGCTATCCCAAGGAATTGATTTGAGGCCCAATCTAGCTGCTATATTGGGGTTAGCCATAGCAGATTCTATTTTTCTTGGTGGCTCCTGTCTAGCCCAAATTTCCAGTTATTGGCCTCCATATAGGCGTCGCATCCTTGTTCATGAGGCAGGGCATCTTTTGGCAGCATACTTGATGGGTTGCCCAGTTCGTGGAGTAATTTTAGACCCATTTGTGGCCTTACAGATGGGCATTCAAGGGCAGGCAGGGACCCAATTTTGGGATGAGAACTTGGAGAATGAGCTAACCGGAGGACGGCTGAGCAGTACTGCTTTTGACAGGTACTGCATGATACTTTTTGCTGGTATTGCCGCTGAAGCTCTTGTATATGGTGAAGCAGAGGGCGGTGAAAATGATGAGAATCTGTTTAGGAGCATTTGTGTGCTTCTGCAACCTCCTCTTTCTGTTCCACAGATGTCAAATCAAGCGAGATGGGCAGTTTTGCAGTCATATAATTTGCTTAAATGGCATAAACATGCTCATAGAGCGGCTGTTAAAGCTCTTGAACGTGGTTGCAGCCTTAGCAGTGTAATTCAAAGTATCGAGGATGCATTGTCTTCTACAGAGGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12853.p1 GENE.S_Transcript_12853~~S_Transcript_12853.p1 ORF type:complete len:417 (+),score=77.90 S_Transcript_12853:100-1251(+)
MALSFLPAHLSGTPLYLSPKSLTCPYGQIKLINTTRHTYLVRAVREWKEYEEAVKDKDLARALRFLKTINGDGVQVQPTESTRSDLGLPFLGRDWEVLDTCLNANDMRLVGSAYAFLKDRGLLPNFGKYRNIVLEGPRDVTPTILKSSTGLEVSKLSPKKWGVSGTSSAVLFAFLGGVSFLLSQGIDLRPNLAAILGLAIADSIFLGGSCLAQISSYWPPYRRRILVHEAGHLLAAYLMGCPVRGVILDPFVALQMGIQGQAGTQFWDENLENELTGGRLSSTAFDRYCMILFAGIAAEALVYGEAEGGENDENLFRSICVLLQPPLSVPQMSNQARWAVLQSYNLLKWHKHAHRAAVKALERGCSLSSVIQSIEDALSSTEG*

Click here to download the sequence:
Link to NCBI Protein BLAST