Transcript Information: S_Transcript_12854.p1


Annotated TAIR IDAT1G56180.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27290.1); Has 436 Blast hits to 436 proteins in 83 species: Archae - 0; Bacteria - 153; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21026243-21028047 | Reverse length=389
E-Value1.1E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.618199881859
Replicate 29.2023552299479
Replicate 37.3579827898303
Condition 2: 8 Hour
Replicate 19.3367641543924
Replicate 29.7949285495176
Replicate 38.8355844994741
Condition 3: 24 Hour
Replicate 112.39385876798
Replicate 28.1613207489956
Replicate 39.9319967605638


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12854.p1 GENE.S_Transcript_12854~~S_Transcript_12854.p1 ORF type:complete len:386 (+),score=70.52 S_Transcript_12854:100-1158(+)
ATGGCACTCTCCTTCCTGCCTGCACACCTCTCAGGTACCCCTTTATATCTCTCCCCGAAGTCTCTCACTTGCCCATATGGGCAGATTAAATTAATCAATACAACCCGGCATACATACTTGGTTCGAGCTGTTAGAGAGTGGAAAGAATATGAAGAAGCAGTGAAAGACAAGGACCTTGCCAGAGCGCTCAGGTTCTTGAAGACAATTAATGGTGATGGGGTTCAAGTTCAACCGACTGAGTCAACTCGTTCTGATTTGGGGTTGCCTTTTTTGGGGAGAGATTGGGAGGTTCTTGATACTTGTTTGAATGCCAATGATATGAGGCTTGTGGGCAGTGCTTATGCCTTTCTTAAGGATAGAGGGTTGTTGCCTAATTTTGGCAAGTATAGAAATATTGTTTTGGAAGGACCACGAGATGTCACGCCTACAATCTTGAAGTCTTCAACTGGCTTGGAAGTGTCTAAACTTTCGCCAAAGAAGTGGGGTGTTTCTGGAACTTCCAGTGCTGTTTTGTTTGCCTTTCTTGGTGGTGTATCATTTCTGCTATCCCAAGGAATTGATTTGAGGCCCAATCTAGCTGCTATATTGGGGTTAGCCATAGCAGATTCTATTTTTCTTGGTGGCTCCTGTCTAGCCCAAATTTCCAGTTATTGGCCTCCATATAGGCGTCGCATCCTTGTTCATGAGGCAGGGCATCTTTTGGCAGCATACTTGATGGGTTGCCCAGTTCGTGGAGTAATTTTAGACCCATTTGTGGCCTTACAGATGGGCATTCAAGGGCAGGCAGGGACCCAATTTTGGGATGAGAACTTGGAGAATGAGCTAACCGGAGGACGGCTGAGCAGTACTGCTTTTGACAGGTACTGCATGATACTTTTTGCTGGTATTGCCGCTGAAGCTCTTGTATATGGTGAAGCAGAGGGCGGTGAAAATGATGAGAATCTGTTTAGGAGCATTTGTGTGCTTCTGCAACCTCCTCTTTCTGTTCCACAGATTTGGAAAGGTCTTTGCATCTTGAGCGTCTACCAGAACCAAACTATTCTGTTTCTGAAGCCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12854.p1 GENE.S_Transcript_12854~~S_Transcript_12854.p1 ORF type:complete len:386 (+),score=70.52 S_Transcript_12854:100-1158(+)
MALSFLPAHLSGTPLYLSPKSLTCPYGQIKLINTTRHTYLVRAVREWKEYEEAVKDKDLARALRFLKTINGDGVQVQPTESTRSDLGLPFLGRDWEVLDTCLNANDMRLVGSAYAFLKDRGLLPNFGKYRNIVLEGPRDVTPTILKSSTGLEVSKLSPKKWGVSGTSSAVLFAFLGGVSFLLSQGIDLRPNLAAILGLAIADSIFLGGSCLAQISSYWPPYRRRILVHEAGHLLAAYLMGCPVRGVILDPFVALQMGIQGQAGTQFWDENLENELTGGRLSSTAFDRYCMILFAGIAAEALVYGEAEGGENDENLFRSICVLLQPPLSVPQIWKGLCILSVYQNQTILFLKP*

Click here to download the sequence:
Link to NCBI Protein BLAST