Transcript Information: S_Transcript_128556.p1


Annotated TAIR IDAT3G23890.1
Annotated Gene Nametopoisomerase II
Annotated Gene Symbol(s)TOPII, ATTOPII
Annotation TypeOrtholog
Chromosome Positionchr3:8624931-8631106 | Forward length=1473
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9100204627251
Replicate 24.1423407042709
Replicate 33.5371330981334
Condition 2: 8 Hour
Replicate 14.6066287293403
Replicate 22.9959608878234
Replicate 34.7767007082495
Condition 3: 24 Hour
Replicate 10.77912437752456
Replicate 23.0350595583399
Replicate 33.0551601567435


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_128556.p1 GENE.S_Transcript_128556~~S_Transcript_128556.p1 ORF type:complete len:1486 (+),score=359.38,DNA_topoisoIV|PF00521.16|6.1e-125,TOPRIM_C|PF16898.1|2.4e-46,TOPRIM_C|PF16898.1|1.1e+04,TOPRIM_C|PF16898.1|7.3e+03,DNA_gyraseB|PF00204.21|2.8e-24,HATPase_c|PF02518.22|2.5e-15,Toprim|PF01751.18|9.8e-07 S_Transcript_128556:94-4551(+)
ATGGCACCACCAAAGAAAATGCCGTTGCAAAGCAGCAACAACATCAACATCCTCTCACCACAAGAAGACATTTCAGCACCAACAGGAGGAAAAACAATCGAAGAGGTGTACCAAAAGAAAACCCAGCTCGAACACATCCTACTCCGACCCGACACCTACATCGGATCCATCGAGAAGCACGACCAGAATCTGTGGGTGTACAACCAGAATGAGCAGATGGTCTACAAGAACATCAGCTACGTGCCGGGTCTGTACAAGATCTTCGACGAAATCCTCGTAAACGCCGCCGATAACAAGCAGCGGGACCCGAAGATGGATCGGGTCGAGGTGGTGATCGATCAGGAAGAAAACCTAATTAGTGTGTACAACACCGGGGATGGGATTCCTGTTGAGATGCATAAAGAGGAAGGGGTTTATGTTCCTGAGTTGATATTTGGGCATCTTTTGACTAGTAGTAATTATAATGATCAGGAGAAGAAGACTACTGGTGGTCGTAATGGTTATGGTGCTAAACTTACTAATATTTTCTCCACTCGATTTGTTATTGAGACTGCTGATGGTAAACGTCAACTCAAGTACAAACAGGTGTTCACGGACAACATGGGTCAGAAAGGCGAACCTGAGATCAAAAAATGCAAGGCCAATGAGAACTGGACCAAAGTGACTTTCCACCCTGACTTGGCTAAGTTCAACATGATCCATCTTGAAGACGATGTTGTTGCCTTGATGAAGAAAAGGGTTGTCGATATGGCTGGATGCCTTGCTTCTTGTCCTGGCAAGAAAGTCAAAGTTTTTTTGAATGGTAAGGAGATTGAGGTCAAGTCGTTTCACGACTATGCTCAGCTTTACCTCAATACTGCCAACAGCAACAGAGATAATCCCTTACCCAGGATTGATAATAACACCAAGGAGGACGCTAATCCGAGGTGGCAGATCACTGTCAGTCAAAGTGATGGACAGTTTCAACAGGTTAGCTTTGTCAATAGCATCAACACAATCAAAGGTGGAACCCATGTTGACTACATAACAAATCAGATCACCAAGTATGTAATGGAGGCTGTCAAGAAGAAGAACAAGAATGCTAACCTCAAGCAGCATAATGTCAAGAACTATTTGTGGGTCTTTGTCAATGCTCTCATAGACAACCCTGCTTTTGATTCCCAGACCAAGGAAACTTTAACTACTCGCGCTAATAGTTTTGGAACTTCTTGTGAACTGTCAGACAAATTCCTCAAGAGAGTGGTGGATGGGTCTGGTGTGGTGGAAAGCCTCCTTTCATGGGCAGACTTTAAGCTTGCCAAAGATCTCAAGAAATCTGATGGGACGAAGACCCGAAGGATACTAGATGTTCCAAAGCTAGAGGATGCCAACGAGGCCGGAGGAAGCAAATCTCATCAGTGCACCTTGATTCTAACTGAAGGAGATTCGGCCAAAGCACTTGCGATGGCTGGGCTTTCTGTTGTCGGGCGAGACTACTATGGTGTGTTTCCTCTTAGAGGCAAGTTGCTGAATGTGAGGGAAGCAAGCCCTAAGCAGATCACTGAGAATGCTGAGATTAATAATCTGAAAAAGATTTTGGGACTGAAACAGGGAGAAAAGTATGACAAGGAAGGCAGCGTCAAGTCATTGCGGTATGGTCATCTAATGATCATGGCAGACCAGGATCATGATGGTTCGCATATTAAGGGCCTAATTATTAATTTCATTCACACATTTTGGCCGTCATTGCTGAGGAGTCCATCCTTCATGCTCGAGTTTATAACACCTATAGTGAAGGCAACTCGAGGAAACGGGAAGAATAAAGAGGTCATACCCTTCTACACCATGCCTGACTATGAGGACTGGGTGAAAAGCGTTGGTGGTAATCTAAAAAACTGGACCGTCAAGTACTATAAGGGGCTGGGAACAAGTGATGAAAAAGAAGGACAGGAGTACTTTGGAAATCTCCAAAGGCACAGGAAGGTCTTCGTTTGGCATGACAACCACGATGGAGACGCAATTGAGCTGGCGTTTAGTAAGAAGAAGATTGAAGCAAGGAAGGATTGGCTTCGAGAGGAAGAGGCTGGGAGTGTCCTTGATCACAAGGAAGAATTAATCAAGTATAGTGATTTTGTTCACAAGGAATTGAAACTGTTTTCAAGGGCAGACCTTCAGAGATCAATTCCTTCCATGGTTGATGGATTTAAGCCAACGCAGAGGAAAGTCCTCTTCGCTGCATTCAAGAGAAACTTGATAAATCAAATTAAAGTTGCTCAGTTCAGTGGTTATGTCTCAGAAAAATCATGTTATCATCACGGTGAACAAAGCATACAGACAACAATTGTGGGAATGGCTCAAACTTTTGTGGGTACCAATAACATCAATCTGTTTATGCCACATGGACAGTTTGGTACACGTAACCTGGGAGGAAAAGATGCTGCAAGTCCTAGGTATATTTTCACCAGGCTTGCAGAGATTACAAGATTCCTGTTCCACAAAGAGGATGATGTACTCCTTAATTACTTGAAGGAAGATGGCTTAATTATTGAGCCCACTTGGTACATGCCAGTTATACCAATGGTTCTAGTGAATGGATCTGAAGGAATTGGAACGGGTTGGAGTACATTTATTCCCAACTATAACCCAAGAGACATCATTGCTAATATCAGGCACTTGCTGGAAGGTGAGCCCGTAGAACCCATGGATCCTTGGTACAACAAGTTCAAAGGAACTATCCAGAAAACTGCAAGGAAAGAAACTGGAGTCACTTACACAGTTACTGGAACCATTGAGAAAATTAGTGAAGACGAGGATGATGAGGAACCAAGTGGCACAGATGTTACTCTTAAAATCACCGAGCTGCCAATTCGGAAGTGGACTCAAGATTATAAGGAATTTTTGTTGTCACTCCTCACACCCGCTGATAAAACCAAGGAAGGATTCATCAAGGAAATGAAGGATTACAGTACCAATGACAATGCATATTTTGAAGTTACGCTAAGCAGGACGAATTTCAACCTGGCCAAACAAGAGGGCTTGCTGAAGAAATTTAAGCTGACAAATACTCTCAGCACAAGTAATATGCACCTCTTTGATGAGGACAACAAGATTACCAGATATGAATCTCCTGAACAGATTCTGGAGAAGTTCTTCCAATTGAGGTTGCAGTACTATAAGAAACGAAAGGAAAAATACTTGGAGATCTATCAGTCCGAGCTGGTGAAGCTGGATAATCAAGTTAGATTCATCCTTGGGGTTGTGGAAGGTGAAATTATAGTTTGCAAGAGGAAGAAGGCTGAATTGGTGGATGAGCTACGTCAGAAAGGTTTTACTCCTATTCCCAAGAATAAACCTGCTGCTGAGACAACAGAGGATAGCGAAGGGAATGAAGATACTGAGCAACAGGAGGACAATTCGGGGCATCATGCACACCTTAGTGACTATGATTATCTTCTGTCCATGGCAATTGGAAGCTTGACAATTGAGAAAGTAAAGGAGCTCTGTGCTAATAGGGATAGAGTTCTTGTGAAGATCGAAGAGTTGCAAAAGCACACCGAAAAGACTTTGTGGTTGAAAGACCTTGAAGCTCTTGAGAAAGCTCTTGATGAGAAAGACAAGAAAGAAGAAGAGGAGGCTAAAGATCAAAGTGTGACGAAGCAACCAACAAAAATGGTGCGCAAGAATAATAGAAATGTAACTAAACCAAAACCTGTCAAGGAAAGCTCTAGTTCAACAGTTCCTGTGACAGAAACAGCTCCTGAACAAGCAAAGGCTAAAGGCAGGGCAGGTCCCAAGAAAGCTGCTTCTAAGAAGGGAAAACTTCCTGTTGTGGAGAGTGATGAGGAAGATGAGGATTTCCCTGATCTGAGAGAACGACTAGCGCAATATCACCTGGATTCCTCCCCTGATAACTCAGCTGCAATGGAAACTGATGTAACTGAAGCAGCAGCTACAAAGAAAGGATCTCAACGAGCTGCTGCCAGTAAGCCCTTGGCTGTTGAAGATATTTCAGGCGATGATGATAGTCAGGACGTGTCTGAAATAGTCACTGTCCCAGAAGCTGGAAAGAAGGGGAGGGGCAGAACTGCAAAAGCCAAGGAACCCAAACAAACTGCAGCCGTGAAAAAACGAGGGCCAGCCACTAAGAAGTCTCAGCTCCCAGGACAGAAGTTGATCACTGAGAGCTTCAAGGCTTCAGAAAGTTCAGAGAACTCGCCTGACAAGAAGGTGAGAAGAATGAGGCAATCCCCATTCAACAAAAAAAGTGGGTCTGTATTGAACAAAGGTGAGGCAGCTACTTCCACAGAGAGCATAAATCTAGACATCATTGAAGAAGTGAGTGAAATTGTGCCTCCAAGGGCTAGACCTCAGCGGGCTCGGAAGCAGCCTACTACATATGTTCTCAGCGATTCGGACAGCGAGGAGTCTGAGCAGCCATCTGAGGATTATTCTGAGACAGAGGATGATGAGGACTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_128556.p1 GENE.S_Transcript_128556~~S_Transcript_128556.p1 ORF type:complete len:1486 (+),score=359.38,DNA_topoisoIV|PF00521.16|6.1e-125,TOPRIM_C|PF16898.1|2.4e-46,TOPRIM_C|PF16898.1|1.1e+04,TOPRIM_C|PF16898.1|7.3e+03,DNA_gyraseB|PF00204.21|2.8e-24,HATPase_c|PF02518.22|2.5e-15,Toprim|PF01751.18|9.8e-07 S_Transcript_128556:94-4551(+)
MAPPKKMPLQSSNNINILSPQEDISAPTGGKTIEEVYQKKTQLEHILLRPDTYIGSIEKHDQNLWVYNQNEQMVYKNISYVPGLYKIFDEILVNAADNKQRDPKMDRVEVVIDQEENLISVYNTGDGIPVEMHKEEGVYVPELIFGHLLTSSNYNDQEKKTTGGRNGYGAKLTNIFSTRFVIETADGKRQLKYKQVFTDNMGQKGEPEIKKCKANENWTKVTFHPDLAKFNMIHLEDDVVALMKKRVVDMAGCLASCPGKKVKVFLNGKEIEVKSFHDYAQLYLNTANSNRDNPLPRIDNNTKEDANPRWQITVSQSDGQFQQVSFVNSINTIKGGTHVDYITNQITKYVMEAVKKKNKNANLKQHNVKNYLWVFVNALIDNPAFDSQTKETLTTRANSFGTSCELSDKFLKRVVDGSGVVESLLSWADFKLAKDLKKSDGTKTRRILDVPKLEDANEAGGSKSHQCTLILTEGDSAKALAMAGLSVVGRDYYGVFPLRGKLLNVREASPKQITENAEINNLKKILGLKQGEKYDKEGSVKSLRYGHLMIMADQDHDGSHIKGLIINFIHTFWPSLLRSPSFMLEFITPIVKATRGNGKNKEVIPFYTMPDYEDWVKSVGGNLKNWTVKYYKGLGTSDEKEGQEYFGNLQRHRKVFVWHDNHDGDAIELAFSKKKIEARKDWLREEEAGSVLDHKEELIKYSDFVHKELKLFSRADLQRSIPSMVDGFKPTQRKVLFAAFKRNLINQIKVAQFSGYVSEKSCYHHGEQSIQTTIVGMAQTFVGTNNINLFMPHGQFGTRNLGGKDAASPRYIFTRLAEITRFLFHKEDDVLLNYLKEDGLIIEPTWYMPVIPMVLVNGSEGIGTGWSTFIPNYNPRDIIANIRHLLEGEPVEPMDPWYNKFKGTIQKTARKETGVTYTVTGTIEKISEDEDDEEPSGTDVTLKITELPIRKWTQDYKEFLLSLLTPADKTKEGFIKEMKDYSTNDNAYFEVTLSRTNFNLAKQEGLLKKFKLTNTLSTSNMHLFDEDNKITRYESPEQILEKFFQLRLQYYKKRKEKYLEIYQSELVKLDNQVRFILGVVEGEIIVCKRKKAELVDELRQKGFTPIPKNKPAAETTEDSEGNEDTEQQEDNSGHHAHLSDYDYLLSMAIGSLTIEKVKELCANRDRVLVKIEELQKHTEKTLWLKDLEALEKALDEKDKKEEEEAKDQSVTKQPTKMVRKNNRNVTKPKPVKESSSSTVPVTETAPEQAKAKGRAGPKKAASKKGKLPVVESDEEDEDFPDLRERLAQYHLDSSPDNSAAMETDVTEAAATKKGSQRAAASKPLAVEDISGDDDSQDVSEIVTVPEAGKKGRGRTAKAKEPKQTAAVKKRGPATKKSQLPGQKLITESFKASESSENSPDKKVRRMRQSPFNKKSGSVLNKGEAATSTESINLDIIEEVSEIVPPRARPQRARKQPTTYVLSDSDSEESEQPSEDYSETEDDEDY*

Click here to download the sequence:
Link to NCBI Protein BLAST