Transcript Information: S_Transcript_128971.p1


Annotated TAIR IDAT2G17972.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 34 Blast hits to 34 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7821624-7822100 | Forward length=158
E-Value7.8E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.639364997664
Replicate 229.726705930125
Replicate 337.079606231239
Condition 2: 8 Hour
Replicate 142.763019530672
Replicate 246.509895856274
Replicate 345.324223328487
Condition 3: 24 Hour
Replicate 133.227217519904
Replicate 237.454930710385
Replicate 333.31964813518


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_128971.p1 GENE.S_Transcript_128971~~S_Transcript_128971.p1 ORF type:3prime_partial len:190 (-),score=19.55 S_Transcript_128971:2-568(-)
ATGACCATGAACACCACCAATACACTCCGTTCCCAAGTCTTCAGAAAACCCTCCATAATCACATCCCACTTTCAATTCAAACCCCTATCTCAATCTCAACTTCCCAGATTGCCTATAATTCTCCCTCCTATTCGCAGCAGCAACAGCAATGGTCAAGGCAGCAATGATGGAGGCAGTCCACAACCACCAACGCCGTCGCCGCCCCCAATCACACCGCTAAGTGCCGTGGAGATAAGGTTTCGCAGAGGGTCAAGAAAGCGGCAGCGACAGCAGCAACAGAAAAATTCCGCTACTGAACTGCCAAACACGACGATGACTCGGACTCCAGCTCCCAAAAGCTGGGAAGAAATGACCCTGTCAGAGAAGGCACTGGAGCTGTACCTGGGTGAGAAAGGCTTACTTTTTTGGCTCAACAAATTTGCCTATGCTTCCATTTTTATTATCATTGGAGCTTGGATACTGTTTAGATTTGTCGGGCCATCACTAAATCTTTACCAACTCGATTCCCCAACACTTCCTCCTGATGCCATGTTCAAGGGTTCCTCCTATCCAAAGAAGTCGAAACTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_128971.p1 GENE.S_Transcript_128971~~S_Transcript_128971.p1 ORF type:3prime_partial len:190 (-),score=19.55 S_Transcript_128971:2-568(-)
MTMNTTNTLRSQVFRKPSIITSHFQFKPLSQSQLPRLPIILPPIRSSNSNGQGSNDGGSPQPPTPSPPPITPLSAVEIRFRRGSRKRQRQQQQKNSATELPNTTMTRTPAPKSWEEMTLSEKALELYLGEKGLLFWLNKFAYASIFIIIGAWILFRFVGPSLNLYQLDSPTLPPDAMFKGSSYPKKSKL

Click here to download the sequence:
Link to NCBI Protein BLAST