Transcript Information: S_Transcript_129014.p1


Annotated TAIR IDAT5G17230.3
Annotated Gene NamePHYTOENE SYNTHASE
Annotated Gene Symbol(s)PSY
Annotation TypeOrtholog
Chromosome Positionchr5:5659839-5662087 | Reverse length=437
E-Value2.5E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.455335071735
Replicate 236.117603646006
Replicate 337.705149326472
Condition 2: 8 Hour
Replicate 121.957253733937
Replicate 217.566044117119
Replicate 320.210581432871
Condition 3: 24 Hour
Replicate 142.233441415149
Replicate 249.020985039211
Replicate 336.245011959945


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_129014.p1 GENE.S_Transcript_129014~~S_Transcript_129014.p1 ORF type:5prime_partial len:135 (-),score=24.91,SQS_PSY|PF00494.15|2.5e-25 S_Transcript_129014:349-753(-)
CCTGTGATGGGTATTGCACCTGAATCGAAGGCAACTACAGAAAGCGTCTACAATGCTGCCTTGGCATTGGGGATCGCGAATCAACTCACTAACATAATGAGAGATGTTGGAGAAGATGCAAGGAGAGGCAGGGTTTATTTGCCGCAAGATGAATTGGCACAGGCAGGTCTGTCAGATGAAGACATATTTGCTGGAAAGGTTACTGATAAATGGAGGACATTCATGAAGAAACAGATCAAACGAGCTAGGATGTTCTTTGATGAAGCCGAGAAAGGAGTCACAGAGCTTAGTGCAGCTAGCAGATGGCCTGTAAGCATCGAATCCCCTCTCAGATTCAAATTATCAATCGTACATTACAAATTGCTTCCCAAAATAACAATCCTCTGTCCCAAAATAATGTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_129014.p1 GENE.S_Transcript_129014~~S_Transcript_129014.p1 ORF type:5prime_partial len:135 (-),score=24.91,SQS_PSY|PF00494.15|2.5e-25 S_Transcript_129014:349-753(-)
PVMGIAPESKATTESVYNAALALGIANQLTNIMRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRTFMKKQIKRARMFFDEAEKGVTELSAASRWPVSIESPLRFKLSIVHYKLLPKITILCPKIMF*

Click here to download the sequence:
Link to NCBI Protein BLAST