Transcript Information: S_Transcript_129164.p1


Annotated TAIR IDAT5G11310.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3606490-3608409 | Forward length=602
E-Value2E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8228083037795
Replicate 21.4355924712082
Replicate 31.7684815422631
Condition 2: 8 Hour
Replicate 12.2639969172299
Replicate 22.0303218799752
Replicate 32.7009806896723
Condition 3: 24 Hour
Replicate 13.2916947725553
Replicate 22.4837053782299
Replicate 32.8504365252357


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_129164.p1 GENE.S_Transcript_129164~~S_Transcript_129164.p1 ORF type:5prime_partial len:584 (+),score=79.36,PPR_2|PF13041.2|39,PPR_2|PF13041.2|3.3e+02,PPR_2|PF13041.2|2.7e+02,PPR_2|PF13041.2|2.8e-08,PPR_2|PF13041.2|5e-07,PPR_2|PF13041.2|2.6e-09,PPR_2|PF13041.2|1.9e-09,PPR_2|PF13041.2|0.00085,PPR_2|PF13041.2|1.7e-06,PPR_1|PF12854.3|1.6e+02,PPR_1|PF12854.3|0.43,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|2.3e-08,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|2.7e-06,PPR_1|PF12854.3|79,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|1.1e+02,PPR|PF01535.16|0.36,PPR|PF01535.16|4.5e+02,PPR|PF01535.16|98,PPR|PF01535.16|0.0084,PPR|PF01535.16|4.1e-06,PPR|PF01535.16|2.3,PPR|PF01535.16|1e-05,PPR|PF01535.16|1.1,PPR|PF01535.16|30,PPR|PF01535.16|2.7,PPR|PF01535.16|1.8e+03,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|22,PPR_3|PF13812.2|0.0052,PPR_3|PF13812.2|0.0057,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|35,PPR_3|PF13812.2|1.3e+04 S_Transcript_129164:1-1752(+)
CCGGGGAACAAACACATTATGCATCGATGTTCACTCCTCTCTGTAACCTTAATCCGCCCCATATCAATATTCAATCCAAAGCTCTCTAATTTGACATTCAAACTCCTCTGTAATCAAGCATCATGCCCAAATCACCCAGATTTTCCTGTACCCAATTCCAAAGTCGAGTCTTCTCCCTCCAATCCCATAAACCCTAACCCTAATTTAAGGTGTTTCGAAATTCTCTCTACCCTTTTGAAGAATTGGGATCTTTTACCCGTTTCAGACCTCGAACATGCTCTAAACGAGACTAGAATTGTATCCAATTCATCTCTTTTACTGGCAATCTTCAAACAACTTTATTTATCACCAAAACAGGCATTTTTTCTATTCAAATGGGCTGAGAAAAGAATTGGGTACTACCCATCTGCTCCAATATTCAATTCAATGATTACCATCCTCACAAAATCAGGCGAATTCAAATGGGCATTGATGGTCTTGTTCAATTTGATCAAGAACTGTGATGGGTCTGATTTGGTTTTAGCTGAAAGCTTGGGGATTTTGATAAAACATTATGCTCTTTCAGGTATGATTTTTCCGGCTATTAAAATTTATAAGCTTGGTAATAGTTTAAATATTGAAACTTTTGAAGTTTTGGTAGTTGCATTGTGTAAATATGGGCATGTTGAAGTAGCTTCTGAGTGTATCGATAAGAAAATGTATGTGAACCCCAACTGGGTCCCTTCAATTGATGTGTACAATATGTTATTAGATGGGTGGTTTCGAGTAGGGAATGTTAAACAAGTCGAGAAGGTTTGGTTGCGAATGAAAAGAGAGAAATTGGTTTATGAAGTTGTTAGTTATGGTATAATTGTTGAAGGATTTTGTAGGATGGGTTGTGTTGATAGGGCCCTTGAATTGCTTGGTGAAATGAGGAGATATGATGTTGGGCCGAACAAGGAGGTGTATGGTCCGATGGTGGATGCTTTAGCTGGAGCTGGGAGGCTTAATGAGGCGCTAGGGATGTTGGAGAGGTTTCTAGTTCTAGAATCAGGTCCTACTTTGTCGACTTATAACTCTTTGGTTAAGGGGTTTTGTAAAGTGGGTGATCTTGCTGGCGCGAGTAGAATTATCAAGATGATGACTAGTAGGGGGTTTGTGCCTACTATTATGACATATAATTACTTCTTTAGGTACTTTGCGGGACATGAGAAAGCTGAAGAGGGACTGAATCTTTACAGAAAGATGGTTGAATTGGGGTATGAACCGGATCAATTTACATTTCGTTTGTTGTTGAAGATGTTGTGTGAGGAAGAGACGTTGGAATTAGCTTTACAGATTAGCAAGGAGATGAGATCAAATGGGTACGTTTTAGACTTGGGCACAAGCACAATGTTGATCAATCTGTTGTGTAAAGTGCACAGATTTCAAGAGGCAGTTTCAGAATTCGAGGATTTGGTCCAGAGAGGTGTTGTTCCGAAATTTGTTACTTACCAGACGCTGTATAATGAGCTTAAGAAGAAGGGATTGCATGAATTGGCTCGGAAGCTTTCTGATTTGGCAGCCATCATTCCATCCTTTGCAACATCACAAACTACATTTGAAGGACTTAACCCCATGTCCCATCAAAGGCGAAAAGTTATCATGCAGAGAGCTAAGGCAATGTCTGATACTCTGAAGGCATGTTCAGACCCTAGAGAACTTTCCAAACATAGAAAATCTCCGAAGAATGCTTTAGCTAGTGAAAAGAAGTTCAGAAGGGCAAAGAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_129164.p1 GENE.S_Transcript_129164~~S_Transcript_129164.p1 ORF type:5prime_partial len:584 (+),score=79.36,PPR_2|PF13041.2|39,PPR_2|PF13041.2|3.3e+02,PPR_2|PF13041.2|2.7e+02,PPR_2|PF13041.2|2.8e-08,PPR_2|PF13041.2|5e-07,PPR_2|PF13041.2|2.6e-09,PPR_2|PF13041.2|1.9e-09,PPR_2|PF13041.2|0.00085,PPR_2|PF13041.2|1.7e-06,PPR_1|PF12854.3|1.6e+02,PPR_1|PF12854.3|0.43,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|2.3e-08,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|2.7e-06,PPR_1|PF12854.3|79,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|1.1e+02,PPR|PF01535.16|0.36,PPR|PF01535.16|4.5e+02,PPR|PF01535.16|98,PPR|PF01535.16|0.0084,PPR|PF01535.16|4.1e-06,PPR|PF01535.16|2.3,PPR|PF01535.16|1e-05,PPR|PF01535.16|1.1,PPR|PF01535.16|30,PPR|PF01535.16|2.7,PPR|PF01535.16|1.8e+03,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|22,PPR_3|PF13812.2|0.0052,PPR_3|PF13812.2|0.0057,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|35,PPR_3|PF13812.2|1.3e+04 S_Transcript_129164:1-1752(+)
PGNKHIMHRCSLLSVTLIRPISIFNPKLSNLTFKLLCNQASCPNHPDFPVPNSKVESSPSNPINPNPNLRCFEILSTLLKNWDLLPVSDLEHALNETRIVSNSSLLLAIFKQLYLSPKQAFFLFKWAEKRIGYYPSAPIFNSMITILTKSGEFKWALMVLFNLIKNCDGSDLVLAESLGILIKHYALSGMIFPAIKIYKLGNSLNIETFEVLVVALCKYGHVEVASECIDKKMYVNPNWVPSIDVYNMLLDGWFRVGNVKQVEKVWLRMKREKLVYEVVSYGIIVEGFCRMGCVDRALELLGEMRRYDVGPNKEVYGPMVDALAGAGRLNEALGMLERFLVLESGPTLSTYNSLVKGFCKVGDLAGASRIIKMMTSRGFVPTIMTYNYFFRYFAGHEKAEEGLNLYRKMVELGYEPDQFTFRLLLKMLCEEETLELALQISKEMRSNGYVLDLGTSTMLINLLCKVHRFQEAVSEFEDLVQRGVVPKFVTYQTLYNELKKKGLHELARKLSDLAAIIPSFATSQTTFEGLNPMSHQRRKVIMQRAKAMSDTLKACSDPRELSKHRKSPKNALASEKKFRRAKS*

Click here to download the sequence:
Link to NCBI Protein BLAST