Transcript Information: S_Transcript_129282.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value5E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16310317406648
Replicate 20.067608139604233
Replicate 30.018838341249847
Condition 2: 8 Hour
Replicate 10.087131318966836
Replicate 20
Replicate 30.021773082333995
Condition 3: 24 Hour
Replicate 10
Replicate 20.046299921504285
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_129282.p1 GENE.S_Transcript_129282~~S_Transcript_129282.p1 ORF type:complete len:979 (-),score=88.64,RVT_1|PF00078.23|2.6e-42,RVT_3|PF13456.2|8.6e+03,RVT_3|PF13456.2|2.2e-14,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|7.3e-15 S_Transcript_129282:36-2972(-)
ATGGTGCTTCAATATTTTCAAGGCTTATATACTGAAGACAATCCAATCATTGGCCCCTTTGACCTGCCGCGAGGACGTTTCCCTAGTCTTTCGAATTGTGACTACAATTCAATGGCGGCCCCCTTTACAATAGAGGAAATTAAATATGCTCTGGATGGGATGGGACCATACAAAGCACCTGGACCAGACGGATTTCATGCAGTCTTCTTCCAACGTAACTGGCAGGTTGTCAAAGATACTGTTTTGGACATGGCCACCTCGGTTCTTCATGGGGTGTCCTCACCCGAATCGGTCAATGACACTCTCATTGTCCTGATACCGAAGATTGAGAACCCCCAAGTTGTGACTCACCTCCGTCCAATCTCTCTTTGTAACGTGGCTCTCAAGTTAATCACCAAATGTCTAGTGAACAGGCTCAAGCCCATCCTGCCCACTATCATAGAGCCCACACAAACAAGCTTTGTTCCTGGTAGACATATCACGGACAATGTTGTGGTGGTTCAAGAAATTCTACACTCAATGCGAACCAAGAGGCATAAAGCAGGCATTATGGCCATCAAGGTTGACCTCGCTAAAGCCTACGATCGTGTTCGTTGGGCTTTCATACGAGATACAATGCTGGAGGCTGGGCTACCCCTCAACTTTATTGAAATAGCCATGAGTTGCATCACAACATCGAAGATGAAGATTCTGTGGAATGGATCCCTAACATCAGCCATTTGTCCTTCTCGGGGGGTGCGCCAAGGGGACCCTCTTTCCCCCTACATCTTTGTCCTATGTATGGAGCGCCTGTCCCATGTGATCAATGAGGCCGTACAAATGGGTGCCAGGAAACCAGTGAGAGCAAGTCGAGATGGTCCTCCCATATCCCACCTCTTCTTCGCTGATGATCTTGTGCTATTCGCTGAAGCAAGTGAAGAGCAGTTTCATGTAATCGACTACTGTCTCCAAAAATTTTGTGGGGCATCAGGGGAGCAAGTGAATTATGCCAAGTCAACCATATGCTTCTCCAAAGGCGTCAGTGATGCTGTTATCGATTCTATTGCTCAAGCAAGTGGTATGGAGATAACCCAAGACCTTGGCAAATACTTGGGGATGCCTACTGACAGACACATGTCTCGTGCTTCATTTCAACACCTGCTTGACAGGGTGAATGCAAGACTTGAGGGATGGCAAACAAAGTATCTCTCCATGGCAGGGCGCGTAACTTTGGCGAAGTCGACTCTATCAAGCATCCCTTATTATTCAATGCAAACTGCCCTGCTCCCAAGGGCGGTTTGTGATGAGATTGACAAAAAAACACGAAGGTTCATTTGGGGCAGCAAAGAAGGAGAGAAGAAAATTCATCTGGCAAACTGGTCCCTGGTCACACAACCAAAGGAAAGAGGGGGCCTGGGTATACGGTCTATGCGGCAGGCCAACACGGCTTTTCTTGCAAAGCTTGGTTGGAGAACGTTAACCGAACCTAGGAGTCTCTGGTCCCGTGTTTTAAGGAGCAAGTACTGTGCTGGGAGATGCGACATCGACATGTTCGCGGAGCATCGAAGTATGTCTAACACTTGGAAAGGTATCACGCATGTAGCATCCACTATTCGCAAAGGTGTTCGAGCTATAATTGGTAATGGGCAACGAACTTTCTTCTGGCTCCACCATTGGGTCGTAGACCACCCACTCGAACATGATGCATCCCAGACCCTCAACGAGGATGAGCTAGGCAAAACAGTCGCGGATTATTGGGATGGGGAACAGTGGATGTGGGATCAGTTCTCTCACCTCCTCCCTCCCAATATCCTTCAAAAAATAGCTTCACTATATGTGATTAACAAGTCAGGAGCTCAAGACCGCCTCTCTTGGGGGGGCACTAGTAATGGCGAGTGCACGATTACATCAGCATTGGAAATTATTAGGATGGATGATGATGGGGCATATAATCCCTTATGGAAGAAGTTGTGGGTTGTTTCTGCATCACAGAGAATACGCAACTTCCTATGGCTTTGTATGCATGATAGCATCCTATCCAATGCTAACCGTGCACGAAGAAATTTAACTACTGATGCCTCGTGTCGGGAATGTAACCATCACGAAGAATCAACCCTTCATATTCTTCGTGATTGCCCTCATGCCAAGAATATCTGGGCGCAACTAATCCCACACCAGGAATTGGAGCGTTTCATGAGGGCTCCCCTACCAGAATGGATAGCTGCTAATATAACCCCAACGGATGACTGGGCGACACTCTTTGCCTATGCTATTTGGTGGTTGTGGCGATGGAGAAATTGTAGAACTATGGGTGATGCAAATGATATCCCTGATAGGGGTGCCGAGTTCATCCAAGCCAAGGCGACAAAGTATTTGGAAGCGGACTCGAAGCGGGTCGCGAAACTGCAAGGTATAAAGCGGTCTCGGGCTGAAGCGTTCATCTCATGGCAAGCTCCTCCAATGGGATGGACTAAACTCAATACCGACGACGCGACAAAGGGTAATCCTGGAGCTGCGGGAGGGGGAGGCATATTTCGTGCCTCTAATGGTGCCTTCATGAAGGCTTATACTGTCAAGCTAGGCACTTGTACAGCTTTCGAGGCGGAATTGCAAGCCATATTCCATGGCCTGAAGTTCTCCCAACAGATGGGCATTACTCAACTAGTTCTTGAAACTGACTCCGAGTTGGCCCGCGATATGCTCATCCATACAACACCACCACACAGCCCGTATTACTTTCTGCTGGAATGCTGCAAGGAACTCATTAATGGCCCTGGAATCAAAGTGCAAATTCACTACGTCTACCGAGAGGCAAATGCAGCGGCTGATTGGCTAGCTAACTTGAGTTTTACTTTACTAGACTTCATTTGTGTTTTTAATGCTCCCCCTCCTAGTATGATAGATGTACTCTTCCAAGACCAGATTGGTGTTGCGAGGCCTAGGCAAATTAGAATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_129282.p1 GENE.S_Transcript_129282~~S_Transcript_129282.p1 ORF type:complete len:979 (-),score=88.64,RVT_1|PF00078.23|2.6e-42,RVT_3|PF13456.2|8.6e+03,RVT_3|PF13456.2|2.2e-14,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|7.3e-15 S_Transcript_129282:36-2972(-)
MVLQYFQGLYTEDNPIIGPFDLPRGRFPSLSNCDYNSMAAPFTIEEIKYALDGMGPYKAPGPDGFHAVFFQRNWQVVKDTVLDMATSVLHGVSSPESVNDTLIVLIPKIENPQVVTHLRPISLCNVALKLITKCLVNRLKPILPTIIEPTQTSFVPGRHITDNVVVVQEILHSMRTKRHKAGIMAIKVDLAKAYDRVRWAFIRDTMLEAGLPLNFIEIAMSCITTSKMKILWNGSLTSAICPSRGVRQGDPLSPYIFVLCMERLSHVINEAVQMGARKPVRASRDGPPISHLFFADDLVLFAEASEEQFHVIDYCLQKFCGASGEQVNYAKSTICFSKGVSDAVIDSIAQASGMEITQDLGKYLGMPTDRHMSRASFQHLLDRVNARLEGWQTKYLSMAGRVTLAKSTLSSIPYYSMQTALLPRAVCDEIDKKTRRFIWGSKEGEKKIHLANWSLVTQPKERGGLGIRSMRQANTAFLAKLGWRTLTEPRSLWSRVLRSKYCAGRCDIDMFAEHRSMSNTWKGITHVASTIRKGVRAIIGNGQRTFFWLHHWVVDHPLEHDASQTLNEDELGKTVADYWDGEQWMWDQFSHLLPPNILQKIASLYVINKSGAQDRLSWGGTSNGECTITSALEIIRMDDDGAYNPLWKKLWVVSASQRIRNFLWLCMHDSILSNANRARRNLTTDASCRECNHHEESTLHILRDCPHAKNIWAQLIPHQELERFMRAPLPEWIAANITPTDDWATLFAYAIWWLWRWRNCRTMGDANDIPDRGAEFIQAKATKYLEADSKRVAKLQGIKRSRAEAFISWQAPPMGWTKLNTDDATKGNPGAAGGGGIFRASNGAFMKAYTVKLGTCTAFEAELQAIFHGLKFSQQMGITQLVLETDSELARDMLIHTTPPHSPYYFLLECCKELINGPGIKVQIHYVYREANAAADWLANLSFTLLDFICVFNAPPPSMIDVLFQDQIGVARPRQIRM*

Click here to download the sequence:
Link to NCBI Protein BLAST