Transcript Information: S_Transcript_129339.p1


Annotated TAIR IDAT3G58720.2
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21716920-21717908 | Reverse length=266
E-Value2.4E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1582814429969
Replicate 23.8782247269069
Replicate 33.7461807669814
Condition 2: 8 Hour
Replicate 15.6645568029885
Replicate 24.2821116536977
Replicate 33.1640711288644
Condition 3: 24 Hour
Replicate 15.5465524487837
Replicate 25.9315444359972
Replicate 33.1527555506395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_129339.p1 GENE.S_Transcript_129339~~S_Transcript_129339.p1 ORF type:complete len:256 (+),score=40.32,zf-RING_2|PF13639.2|4.8e-14,zf-RING_11|PF17123.1|5.6e-11,zf-RING_11|PF17123.1|2.9e+03,zf-RING_5|PF14634.2|9e-09,zf-C3HC4|PF00097.21|8.4e-09,zf-C3HC4|PF00097.21|2.6e+02,zf-rbx1|PF12678.3|9.4e-08,zf-C3HC4_2|PF13923.2|8.6e-08,zf-RING_UBOX|PF13445.2|4.1e+03,zf-RING_UBOX|PF13445.2|2.6e-06,zf-RING_UBOX|PF13445.2|1.1e+02 S_Transcript_129339:262-1029(+)
ATGAACAGGAGAAGTGATTTCCCATCCAATGTTTCGAGGCCTGTAACTCAACCAAGTTATGGAGATGCTAATCAGCCCGTGTTTCAAGATAATGCAAGAGTTGGTGCACCGGTGGAATTTAGGCCGTTTGGGGAAAGACTTCCTAGGAGACCTTTTGGCCTGAGTAGCATGCCCTTGCACCCTCATCGCCCCACGAGAATCATAATCTACAACATGGGTCGAGGGATGGGCCCTAGGCTTGCTCCATTTGAGCACCAGCTAACACCCAGATTTCTCGACCAAGGGAACTCGCCTGCACCTACAGAGATTGATGAATCCAAGCTAAGCAGAGAAGAGCAAGAATTTGTCCTAAATAAACTCAAGAAAGAAATCTACAACCCTGTGCCTAAGATGTTGGCAAGAAGAGTGAGCCTTTACTATAGGGATTTCAATCGGGACCTCAATAACAAGGCTGTCGACAAGCATAGAGATGAAGAAGGCAAAAGCTGTGCTGTTTGTTTAGAAGATTTTCAGCCTAGAGAACAAGTAATGGTTACGCCTTGTAAGCACATATTCCATGAGGAATGCATTGTACCTTGGGTGAAGAATCACGGGCAGTGTCCTGTATGTAGGCACGCTTTGTGTGAGAGAATGAGGGAAAACAACCCATCTTTGATGAACAACAGCAATAATAGAGGTCCAACTTTGCCAGTTGATCATGAACTGTTTGAAGGTGATCTCATTTCACTTATTCAATCAGTGGATGAAACCTTTCCACGGGGAGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_129339.p1 GENE.S_Transcript_129339~~S_Transcript_129339.p1 ORF type:complete len:256 (+),score=40.32,zf-RING_2|PF13639.2|4.8e-14,zf-RING_11|PF17123.1|5.6e-11,zf-RING_11|PF17123.1|2.9e+03,zf-RING_5|PF14634.2|9e-09,zf-C3HC4|PF00097.21|8.4e-09,zf-C3HC4|PF00097.21|2.6e+02,zf-rbx1|PF12678.3|9.4e-08,zf-C3HC4_2|PF13923.2|8.6e-08,zf-RING_UBOX|PF13445.2|4.1e+03,zf-RING_UBOX|PF13445.2|2.6e-06,zf-RING_UBOX|PF13445.2|1.1e+02 S_Transcript_129339:262-1029(+)
MNRRSDFPSNVSRPVTQPSYGDANQPVFQDNARVGAPVEFRPFGERLPRRPFGLSSMPLHPHRPTRIIIYNMGRGMGPRLAPFEHQLTPRFLDQGNSPAPTEIDESKLSREEQEFVLNKLKKEIYNPVPKMLARRVSLYYRDFNRDLNNKAVDKHRDEEGKSCAVCLEDFQPREQVMVTPCKHIFHEECIVPWVKNHGQCPVCRHALCERMRENNPSLMNNSNNRGPTLPVDHELFEGDLISLIQSVDETFPRGA*

Click here to download the sequence:
Link to NCBI Protein BLAST