Transcript Information: S_Transcript_129426.p1


Annotated TAIR IDAT1G27700.1
Annotated Gene NameSyntaxin/t-SNARE family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9640394-9641752 | Reverse length=297
E-Value3.6E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.136043852365
Replicate 217.75166975892
Replicate 320.297608965572
Condition 2: 8 Hour
Replicate 119.425714742906
Replicate 219.671797941829
Replicate 319.662031842526
Condition 3: 24 Hour
Replicate 116.509207925363
Replicate 217.128110472929
Replicate 315.87249346184


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_129426.p1 GENE.S_Transcript_129426~~S_Transcript_129426.p1 ORF type:complete len:348 (-),score=85.07,Syntaxin-6_N|PF09177.7|8e-20 S_Transcript_129426:64-1107(-)
ATGGCAATGCACTTTGATCGGTGGGAAAAGGATCCCTTTTTCTCAGCAGCTGAGGAGGTTCAAGAATCTGCTGATAGGATGGAATCTACTTATAGAACGTGGATTCATGCTTCGAAGGATTCCTCCTGTAGCCGGAATCCCGATGAGCTTCACCGTGATTTACGCACTGCCCTCGGCACCGCCAAATGGCAGTTGGAAGAGTTTGAGCGAGCTGTGAGATCTAGTTACAAGAATAATGCTGCAGATGAAGCTGAAGACCGGCATCGCCAGTTTATTCTTGCAATGGAGGAAAAAGTTTCTCTAGTTGAGAAGGCGTTACAGGAATTGTCAGTTTCTGATAGTAAGACATCAACCCAATGGGTACGGTTGGATGAAGGGGAACGAGATGAACTTGCCTTGTTCCTCTCTGGTCCAACCATTTCGGGTGACAAATTGGATATCAAAGTTGTTGGCAATGGCGATAAGCATGCTAATTCACATGAAAGGACTACAAAGCCTGTCTCTAGCATTTGGAAAAACTCTTCTTGTGCATTGGAGTTGGCGTTATTGGAAGGGAAAGAAGTAAAGTCGCCTGGCCATCGTAGAACTGCCAGTGCTAGTGCTGACATTGGTTCCTGGAATATTCTGGTTAATAAGGATAAAATTGCACGTGATTCCTCCAGTGGACGAGCTGATCTTCCTCCCCGGAGAGTGCCAAGTTACTCAGGTTTTATTGGCACCATGGAGTCTGCTTCCAAATTAAAGGTGCCCAAGAATGGTTTCAGGAAATGGAAGGCTGTGGACCGGCAACATGAAGATGATGTTGCCTTGTTGAGGACTCAAGATTTGAGCAGAGGACCAATTGCATGCTTTGAGAAAAGCAAGAGCTGTCTCAATACTGGTGATGATTCCTGTGATAAACATTTGTATGGCTGGTATGGAGCTGTTCAGAGGTTGCTTCAAAGGTCTCAGTATCAAGTACAATATAGTCGTCCTGTACAATTGACCTTCTGGAGTGTCCTTTTGCTTTTCTCCATTGTCCTTTTCATAGTGCGTGCAATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_129426.p1 GENE.S_Transcript_129426~~S_Transcript_129426.p1 ORF type:complete len:348 (-),score=85.07,Syntaxin-6_N|PF09177.7|8e-20 S_Transcript_129426:64-1107(-)
MAMHFDRWEKDPFFSAAEEVQESADRMESTYRTWIHASKDSSCSRNPDELHRDLRTALGTAKWQLEEFERAVRSSYKNNAADEAEDRHRQFILAMEEKVSLVEKALQELSVSDSKTSTQWVRLDEGERDELALFLSGPTISGDKLDIKVVGNGDKHANSHERTTKPVSSIWKNSSCALELALLEGKEVKSPGHRRTASASADIGSWNILVNKDKIARDSSSGRADLPPRRVPSYSGFIGTMESASKLKVPKNGFRKWKAVDRQHEDDVALLRTQDLSRGPIACFEKSKSCLNTGDDSCDKHLYGWYGAVQRLLQRSQYQVQYSRPVQLTFWSVLLLFSIVLFIVRAI*

Click here to download the sequence:
Link to NCBI Protein BLAST