Transcript Information: S_Transcript_129797.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.5743813216226
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_129797.p1 GENE.S_Transcript_129797~~S_Transcript_129797.p1 ORF type:3prime_partial len:139 (+),score=18.69,gag_pre-integrs|PF13976.2|1.4e-13 S_Transcript_129797:116-529(+)
ATGGGAAATAATGCCACTTGTAAGATTATTGGGAGAGGGAATGTGAAAATTAAAACTCATGATGGAAACACCCGTACTCTTTCGGGTGTTAGACATGTTCCCGATCTCCGTAGAAACCTCATTTCTCTTGGTATCCTCGAATCTTTGGGATGTCATTACTCCGCTCAAGGTGGAGTTCTTAAGGTGTCTAAGGGGTCACTTGTTTTGATGAAAGGCTCTAGAGTTGGGTCTTTATATGTGTTACAAGGTTCTACCGTCACCGGTTCCACCGCCGTTGCCACCACCTCCAATGCTAATGACCCCAAACTATGGCATATGCGTTTGGGTCATATGGGTGAGAAAGGTATGGCTATTCTTTGTAAACGAGGTTTGCTTGGCTCACTTACTAACTGTGATATTGATTTTTGTGAGCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_129797.p1 GENE.S_Transcript_129797~~S_Transcript_129797.p1 ORF type:3prime_partial len:139 (+),score=18.69,gag_pre-integrs|PF13976.2|1.4e-13 S_Transcript_129797:116-529(+)
MGNNATCKIIGRGNVKIKTHDGNTRTLSGVRHVPDLRRNLISLGILESLGCHYSAQGGVLKVSKGSLVLMKGSRVGSLYVLQGSTVTGSTAVATTSNANDPKLWHMRLGHMGEKGMAILCKRGLLGSLTNCDIDFCEH

Click here to download the sequence:
Link to NCBI Protein BLAST