Transcript Information: S_Transcript_129935.p2


Annotated TAIR IDAT5G61890.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24852639-24853744 | Reverse length=248
E-Value3.9E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25345715462077
Replicate 21.6809744424773
Replicate 30.1756451055581
Condition 2: 8 Hour
Replicate 10
Replicate 20.21306522514025
Replicate 30.40601614485679
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.24020994671539


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_129935.p2 GENE.S_Transcript_129935~~S_Transcript_129935.p2 ORF type:3prime_partial len:105 (+),score=22.68,AP2|PF00847.16|2.6e-14 S_Transcript_129935:621-932(+)
ATGTGGAGTTGCAAGATCTCCAAGGAAGTACGAGAGAAGAAAGAGGGAGAAAAAAAACATTATAGAGGAGTAAGGCAAAGGCCATGGGGGAAATGGGCAGCAGAGATACGAGACCCTAAGAAAGCAGCAAGAGTGTGGTTGGGGACATTTGAGACGGCAGAGGCAGCTGCCATGGCATACGATGAGGCAGCCCTCAAGTTCAAAGGCAACAAAGCCAAGCTTAATTTCCCTCAAAGATTGGTTCATGGTCATCCCCAGTACTATTATGTTATGTCTGATCAACAAACTAATACTGACGACCGTACTGGTACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_129935.p2 GENE.S_Transcript_129935~~S_Transcript_129935.p2 ORF type:3prime_partial len:105 (+),score=22.68,AP2|PF00847.16|2.6e-14 S_Transcript_129935:621-932(+)
MWSCKISKEVREKKEGEKKHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAMAYDEAALKFKGNKAKLNFPQRLVHGHPQYYYVMSDQQTNTDDRTGT

Click here to download the sequence:
Link to NCBI Protein BLAST