Transcript Information: S_Transcript_130061.p1


Annotated TAIR IDAT5G35695.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:13869120-13869941 | Forward length=211
E-Value2.6E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.670272044049
Replicate 22.49244902951
Replicate 31.0803276366963
Condition 2: 8 Hour
Replicate 13.836785705593
Replicate 24.305878817688
Replicate 33.7458811690762
Condition 3: 24 Hour
Replicate 11.9194249092154
Replicate 22.7500022414815
Replicate 34.0101995288469


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_130061.p1 GENE.S_Transcript_130061~~S_Transcript_130061.p1 ORF type:5prime_partial len:239 (+),score=33.69,DDE_Tnp_4|PF13359.2|1.1e-33,DDE_Tnp_1|PF01609.17|8.1e-07 S_Transcript_130061:1-717(+)
TGGAAATGTTTCAAGAATTGTTTAGGAGCTTTAGATGGCACCTACATTAATGTCCACATTGCAAGTGAGGATAGACCAAGGTATCGAAAAAGAAAAGGCTCTCTTGCTATGAATGTGTTAGGTGTTTGTACACCTAATATGGAATTCATTTTTGTTTCACCGGGTTGGGAAGGTTCCGCACATGATGGTCGTGTCCTTCGAGATGCCCTGTCTAAACCTAATGGGTTGAAGGTGCCTCAAGGTTGCTATTACTTGGTAGATGCTGGATACACTAATTGTCAGGGGTTTCTTGCCCCTTATAGAGGTCATCGCTATCACCTAAAAGAATGGGGGGATCGACAACCTGTGAGTGCAGAGGAGTATTTCAACATGAAACATGCCAAAGCTAGAAATGTAATCGAAAGATGCTTCGGTCTCATGAAAGGAAGATGGGCTATTCTTAGGAGTCCTTCATTTTTTCCAATACGAACTCAATGTCGTATAGTCCATGCATGTTCTCTTTTGCATAACTTGATTCGAAAGTATATGCCCACTGAGTATATGATTGATTATGGGGAAGAGGATGATGATGATTATGGTGATGATGATGACGGTGATGAACAAGAAGTAGAATTTATCACTAATGTTCAATCATCAAATGCTTGGACTACTTTCCGAAACGACCTAGCACAAAACTTGTTCAATGAGTGGAGGGTTAGATCTACAAGAGGAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_130061.p1 GENE.S_Transcript_130061~~S_Transcript_130061.p1 ORF type:5prime_partial len:239 (+),score=33.69,DDE_Tnp_4|PF13359.2|1.1e-33,DDE_Tnp_1|PF01609.17|8.1e-07 S_Transcript_130061:1-717(+)
WKCFKNCLGALDGTYINVHIASEDRPRYRKRKGSLAMNVLGVCTPNMEFIFVSPGWEGSAHDGRVLRDALSKPNGLKVPQGCYYLVDAGYTNCQGFLAPYRGHRYHLKEWGDRQPVSAEEYFNMKHAKARNVIERCFGLMKGRWAILRSPSFFPIRTQCRIVHACSLLHNLIRKYMPTEYMIDYGEEDDDDYGDDDDGDEQEVEFITNVQSSNAWTTFRNDLAQNLFNEWRVRSTRGN*

Click here to download the sequence:
Link to NCBI Protein BLAST