Transcript Information: S_Transcript_130114.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value6E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6409848553996
Replicate 21.6841824089706
Replicate 30.98548971439087
Condition 2: 8 Hour
Replicate 11.4651031515588
Replicate 22.9032169990485
Replicate 32.9288950907608
Condition 3: 24 Hour
Replicate 12.1678128654788
Replicate 22.4220867333501
Replicate 31.5402775209231


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_130114.p1 GENE.S_Transcript_130114~~S_Transcript_130114.p1 ORF type:internal len:131 (-),score=19.42,rve|PF00665.22|1.3e-12,gag_pre-integrs|PF13976.2|2.6e-07 S_Transcript_130114:3-392(-)
GGTCACATAAGTGAGAAAGGGATGAAGATTATGGCTTCGAGGGGCAAACTTTCCAATGTGAAATCAGTCGATCTTAAGGTATGTGAGAGTTGTGTGATGGGAAAGCAGAAAAGAATGATTTTCACAAAGAACAGGAAAGAGTTGAGAAAGGAGAAGCTAGAGTTAGTGCACACTGATGTGTACGGTCCATACCACACGAAATCGCTTGGAGGCTCACGGTATATTGTCACCTTTATTGATGACTTTAACAGGAAAGTGTGGGTGTACTTGCTAAAACGAAAATCCGAGGCGTTTGAGTTTTTCAAAGTTTGGAGAGCTGAGGTCGAGAATCAGACAGGAAAGAAGATCAAAATTATGAGGTCTGACAATGGGGGTGAGTATGATGATAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_130114.p1 GENE.S_Transcript_130114~~S_Transcript_130114.p1 ORF type:internal len:131 (-),score=19.42,rve|PF00665.22|1.3e-12,gag_pre-integrs|PF13976.2|2.6e-07 S_Transcript_130114:3-392(-)
GHISEKGMKIMASRGKLSNVKSVDLKVCESCVMGKQKRMIFTKNRKELRKEKLELVHTDVYGPYHTKSLGGSRYIVTFIDDFNRKVWVYLLKRKSEAFEFFKVWRAEVENQTGKKIKIMRSDNGGEYDDR

Click here to download the sequence:
Link to NCBI Protein BLAST