Transcript Information: S_Transcript_130133.p1


Annotated TAIR IDAT2G16880.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7312262-7314493 | Reverse length=743
E-Value6E-231
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0308777502649
Replicate 25.2322821085015
Replicate 35.4186167939959
Condition 2: 8 Hour
Replicate 17.3613336799589
Replicate 26.8088234990472
Replicate 37.0210301729188
Condition 3: 24 Hour
Replicate 14.9215745413592
Replicate 25.076216031593
Replicate 35.2172081312296


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_130133.p1 GENE.S_Transcript_130133~~S_Transcript_130133.p1 ORF type:complete len:759 (+),score=149.34,PPR_2|PF13041.2|5.5e+03,PPR_2|PF13041.2|7.5e-07,PPR_2|PF13041.2|2.7e-07,PPR_2|PF13041.2|4.1e-14,PPR_2|PF13041.2|1.5e-19,PPR_2|PF13041.2|3e-12,PPR_2|PF13041.2|3.7e-17,PPR_2|PF13041.2|2e-11,PPR_2|PF13041.2|7.8e-18,PPR_2|PF13041.2|1.1e-18,PPR_2|PF13041.2|9.3e-07,PPR_2|PF13041.2|5.7e-14,PPR_2|PF13041.2|5.7e-16,PPR_2|PF13041.2|9.8e-19,PPR_2|PF13041.2|7.9e-07,PPR_2|PF13041.2|6.9e-14,PPR_2|PF13041.2|0.27,PPR_2|PF13041.2|0.00028,PPR_1|PF12854.3|0.064,PPR_1|PF12854.3|3.4e+03,PPR_1|PF12854.3|4e+03,PPR_1|PF12854.3|6.6e-09,PPR_1|PF12854.3|4e-11,PPR_1|PF12854.3|1.6e-10,PPR_1|PF12854.3|9.8e-13,PPR_1|PF12854.3|3.2e-09,PPR_1|PF12854.3|7.3e-08,PPR_1|PF12854.3|1.6e-15,PPR_1|PF12854.3|5.7e-07,PPR_1|PF12854.3|0.024,PPR_1|PF12854.3|1.5e-09,PPR_1|PF12854.3|9.7e-12,PPR_1|PF12854.3|1.1e-09,PPR_1|PF12854.3|8.7e-09,PPR_1|PF12854.3|0.092,PPR_1|PF12854.3|0.87,PPR_1|PF12854.3|3.8e+03,PPR|PF01535.16|1e+03,PPR|PF01535.16|0.15,PPR|PF01535.16|5.8e+02,PPR|PF01535.16|2.1e+03,PPR|PF01535.16|0.00039,PPR|PF01535.16|2.1e-07,PPR|PF01535.16|5.7e-07,PPR|PF01535.16|3.1e-07,PPR|PF01535.16|2.2e-08,PPR|PF01535.16|4.1e-05,PPR|PF01535.16|1.9e-10,PPR|PF01535.16|0.0027,PPR|PF01535.16|0.00016,PPR|PF01535.16|4.9e-07,PPR|PF01535.16|1.2e-07,PPR|PF01535.16|2e-05,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|0.024,PPR|PF01535.16|1.6,PPR_3|PF13812.2|30,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|1.4e-06,PPR_3|PF13812.2|0.096,PPR_3|PF13812.2|0.0064,PPR_3|PF13812.2|8.2e-07,PPR_3|PF13812.2|0.096,PPR_3|PF13812.2|1.5e-06,PPR_3|PF13812.2|8.2e+02,PPR_3|PF13812.2|0.29,PPR_3|PF13812.2|0.0088,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|18,PPR_3|PF13812.2|0.00026,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|1.7e+03,MRP-S27|PF10037.5|2.6e+03,MRP-S27|PF10037.5|6.1,MRP-S27|PF10037.5|2.5,MRP-S27|PF10037.5|0.029,MRP-S27|PF10037.5|0.0088,MRP-S27|PF10037.5|2.8e+02,ATP13|PF12921.3|2.8e+03,ATP13|PF12921.3|2.1e+03,ATP13|PF12921.3|45,ATP13|PF12921.3|4.8,ATP13|PF12921.3|0.29,ATP13|PF12921.3|2.1e+03,ATP13|PF12921.3|99,TPR_11|PF13414.2|3.2,TPR_11|PF13414.2|31,TPR_11|PF13414.2|3.2e+02,TPR_11|PF13414.2|1.9e+02,TPR_11|PF13414.2|12,ECSIT|PF06239.7|7.5,ECSIT|PF06239.7|58,ECSIT|PF06239.7|0.41,ECSIT|PF06239.7|2.4e+02 S_Transcript_130133:139-2277(+)
ATGGTTACAACCCCACCAATCCCAAAAACTCCAAACTTATGTCTTTCTTCTCTTCTAAAACTCCTTCCATCCCTTTTCAAGAACAACAAATTCTCAGATGCAAAATCCCTCTTACTTTCCTTCATCTCCACAGACACTTCTCACACTCTTCACAAACACCTCCTTCACCCATCTTCACAATTACCTAAACCAACTACAGCCCTATATGACACAGCAATTGGGTCATATTGTCAAGTGGGTAATCCCCATTTTGCCATCCCCATCTTCAAAAAGATGAAGCGCTTAAGGCTCAAACCAAAGCTCCTAACTTGCAACACTTTGTTTAATGCCCTGGTAAAAAACCCATCTTCTCATTCTCTCTATTTCTGTAGGGAATTGTTTGATGACATGACTAAAAAACTTGGGATTTCCCCAAATGTTAATACTTTCAATATTTTAATTAATGGGTATTGCTTAGAATTTAGGTTCAAGGAGGCTTTGGATATGCTTAGTTTAATGGGGTTTTTTAATTGTTCCCCTGATAATGTCACTTATAATACTATATTGAATGCTTTGTGTAGAAAAGGTAGGTTGAATGAGGTTAGAGATTTGTTAACTGATATGAAAAGTAAAGGGTTGGTCCCTAATAAGCATACTTATAATATTTTGGTTAATGGGTATTGTAAGATGGGTTGGTTGAAGGAGGCTACTCAGATTATTGATTTGATGACTCAGAATAACTTTTTGCCGGACATTAGGACGTATAATATGTTGATTAGTGGGTTTTGTAATGAAGGGAAGATTGACGAGGCGTCTAGGTTGCGAGATGAGATGGAAAAATTGAAACTTTTGCCGGATGTGGTTACTTATAATACGTTGATAAACGGGTGCCTTGAGTTCAGGAGTGTTGATGAGGCATTCGATTTGTTTGATGAGATGAGTGATAAGGGTGTGGAGAAAACTGTGGTTACTTATAATGTGATTATCAAGTGGTTTTGCAAGGGTGGGAAGATTGAAGAAGCTATTAATGAGCTTCGGAAGATGGAGAAGAGTGGAGTTTCTCCTGATTGTGTGACCTATAATACCTTGATAAATGCGTATTGCAAAGCGGGAAATTTTGCCGAGGCATACAAGATGATGGATGAGATGGGTAGAAAGGGTTTGAAGATGAATGCTTTTACGTTGAATACTTTAATTCATGCGCTTTGTGTGGAGATGAGACTTGAGGAGGCTTATGATTTACTGAAGTGTGGCATTAAGCGGGGCTATGCTGTTGATGAAGTTAGCTATGGCACATTAATTGCAGGTTATTTCAGGGATGAAAATGAGGGCCAAGCATTGAATATCTGGGGAGAGATGAAAGAGAGAGGGATCATTCCAAGTATTGTCACTTATAATACTGTCATAAAAGGTTTCTGCAAATCAGGAAAAACCAACAAAGCTATTGACAAGTTGAATGAACTTCTAGAAAATGGTGTGTTCCCAGATGAGACAACGTACAACACTATCATCCATGGTTACTGTTGGGAGGGTAAGGTTGAGCAAGCATTTCAGTTCCACAACAAAATGGTTGAGAATTCATTTAAGCCAGATGTATACACATGTAATATTCTACTGCGGGGACTTTGCTCTGATGGGATGCTTGAAAAAGCTATTAAGCTCTTCAACACCTGGGTCTCGAAAGGAAAAGAAGTTGATGCAGTTACCTACAACACACTGATAACTTGTCTTTGCAAGGAAGACAGGCTTGAAGATGCTTTGATTTTTGTCAAAGACATGGAGGAAAAGAGGTTAGAACCTGATAGGTACACATTTAATGCCATTTTCACTGCACTTCTTAATGCAGGGAGAATGGAGGAAGCAGAAGAAATCCGGGAAAGATTGGTTGAGATTGAAAATCTACAGGATCAACTTCCACTAACTGAGAAGCCTGAAATGGTTCAGACTGGTGATGTCAAAGTGGAGTTAGATTCTAGTTCTGATTCTTTTTCAGAGAAAATAAATCAACTTTGTACAGAAGGGAGATACAAGGATGCAATGGAGGTGTATGAAGAGGCTGCTGGTAAAGGGGTAGCTGTACATAAGACTACTTATTTTACATTGATGAAGGGTTTGCTCAAGAGACGAAAAAGCATATCAAAGAGAGCTCCTCTGCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_130133.p1 GENE.S_Transcript_130133~~S_Transcript_130133.p1 ORF type:complete len:759 (+),score=149.34,PPR_2|PF13041.2|5.5e+03,PPR_2|PF13041.2|7.5e-07,PPR_2|PF13041.2|2.7e-07,PPR_2|PF13041.2|4.1e-14,PPR_2|PF13041.2|1.5e-19,PPR_2|PF13041.2|3e-12,PPR_2|PF13041.2|3.7e-17,PPR_2|PF13041.2|2e-11,PPR_2|PF13041.2|7.8e-18,PPR_2|PF13041.2|1.1e-18,PPR_2|PF13041.2|9.3e-07,PPR_2|PF13041.2|5.7e-14,PPR_2|PF13041.2|5.7e-16,PPR_2|PF13041.2|9.8e-19,PPR_2|PF13041.2|7.9e-07,PPR_2|PF13041.2|6.9e-14,PPR_2|PF13041.2|0.27,PPR_2|PF13041.2|0.00028,PPR_1|PF12854.3|0.064,PPR_1|PF12854.3|3.4e+03,PPR_1|PF12854.3|4e+03,PPR_1|PF12854.3|6.6e-09,PPR_1|PF12854.3|4e-11,PPR_1|PF12854.3|1.6e-10,PPR_1|PF12854.3|9.8e-13,PPR_1|PF12854.3|3.2e-09,PPR_1|PF12854.3|7.3e-08,PPR_1|PF12854.3|1.6e-15,PPR_1|PF12854.3|5.7e-07,PPR_1|PF12854.3|0.024,PPR_1|PF12854.3|1.5e-09,PPR_1|PF12854.3|9.7e-12,PPR_1|PF12854.3|1.1e-09,PPR_1|PF12854.3|8.7e-09,PPR_1|PF12854.3|0.092,PPR_1|PF12854.3|0.87,PPR_1|PF12854.3|3.8e+03,PPR|PF01535.16|1e+03,PPR|PF01535.16|0.15,PPR|PF01535.16|5.8e+02,PPR|PF01535.16|2.1e+03,PPR|PF01535.16|0.00039,PPR|PF01535.16|2.1e-07,PPR|PF01535.16|5.7e-07,PPR|PF01535.16|3.1e-07,PPR|PF01535.16|2.2e-08,PPR|PF01535.16|4.1e-05,PPR|PF01535.16|1.9e-10,PPR|PF01535.16|0.0027,PPR|PF01535.16|0.00016,PPR|PF01535.16|4.9e-07,PPR|PF01535.16|1.2e-07,PPR|PF01535.16|2e-05,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|0.024,PPR|PF01535.16|1.6,PPR_3|PF13812.2|30,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|1.4e-06,PPR_3|PF13812.2|0.096,PPR_3|PF13812.2|0.0064,PPR_3|PF13812.2|8.2e-07,PPR_3|PF13812.2|0.096,PPR_3|PF13812.2|1.5e-06,PPR_3|PF13812.2|8.2e+02,PPR_3|PF13812.2|0.29,PPR_3|PF13812.2|0.0088,PPR_3|PF13812.2|2.1,PPR_3|PF13812.2|18,PPR_3|PF13812.2|0.00026,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|1.7e+03,MRP-S27|PF10037.5|2.6e+03,MRP-S27|PF10037.5|6.1,MRP-S27|PF10037.5|2.5,MRP-S27|PF10037.5|0.029,MRP-S27|PF10037.5|0.0088,MRP-S27|PF10037.5|2.8e+02,ATP13|PF12921.3|2.8e+03,ATP13|PF12921.3|2.1e+03,ATP13|PF12921.3|45,ATP13|PF12921.3|4.8,ATP13|PF12921.3|0.29,ATP13|PF12921.3|2.1e+03,ATP13|PF12921.3|99,TPR_11|PF13414.2|3.2,TPR_11|PF13414.2|31,TPR_11|PF13414.2|3.2e+02,TPR_11|PF13414.2|1.9e+02,TPR_11|PF13414.2|12,ECSIT|PF06239.7|7.5,ECSIT|PF06239.7|58,ECSIT|PF06239.7|0.41,ECSIT|PF06239.7|2.4e+02 S_Transcript_130133:139-2277(+)
MVTTPPIPKTPNLCLSSLLKLLPSLFKNNKFSDAKSLLLSFISTDTSHTLHKHLLHPSSQLPKPTTALYDTAIGSYCQVGNPHFAIPIFKKMKRLRLKPKLLTCNTLFNALVKNPSSHSLYFCRELFDDMTKKLGISPNVNTFNILINGYCLEFRFKEALDMLSLMGFFNCSPDNVTYNTILNALCRKGRLNEVRDLLTDMKSKGLVPNKHTYNILVNGYCKMGWLKEATQIIDLMTQNNFLPDIRTYNMLISGFCNEGKIDEASRLRDEMEKLKLLPDVVTYNTLINGCLEFRSVDEAFDLFDEMSDKGVEKTVVTYNVIIKWFCKGGKIEEAINELRKMEKSGVSPDCVTYNTLINAYCKAGNFAEAYKMMDEMGRKGLKMNAFTLNTLIHALCVEMRLEEAYDLLKCGIKRGYAVDEVSYGTLIAGYFRDENEGQALNIWGEMKERGIIPSIVTYNTVIKGFCKSGKTNKAIDKLNELLENGVFPDETTYNTIIHGYCWEGKVEQAFQFHNKMVENSFKPDVYTCNILLRGLCSDGMLEKAIKLFNTWVSKGKEVDAVTYNTLITCLCKEDRLEDALIFVKDMEEKRLEPDRYTFNAIFTALLNAGRMEEAEEIRERLVEIENLQDQLPLTEKPEMVQTGDVKVELDSSSDSFSEKINQLCTEGRYKDAMEVYEEAAGKGVAVHKTTYFTLMKGLLKRRKSISKRAPLQ*

Click here to download the sequence:
Link to NCBI Protein BLAST