Transcript Information: S_Transcript_130219.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value4E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0670292221499
Replicate 20.64260552109266
Replicate 31.0743341407923
Condition 2: 8 Hour
Replicate 11.2422557466291
Replicate 21.0860120698896
Replicate 31.4486498372317
Condition 3: 24 Hour
Replicate 11.4846037323705
Replicate 20.88014802238242
Replicate 30.4897484350508


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_130219.p1 GENE.S_Transcript_130219~~S_Transcript_130219.p1 ORF type:5prime_partial len:103 (+),score=16.09,zf-RVT|PF13966.2|3.8e-13 S_Transcript_130219:1-309(+)
GCTTTCCCTATAGCGAAGATCATTTGGAAGGCAAAAGCCCATCTTGAAGTCCAGGCTTTTGTTTGGATCTTAGCATTGGGCAAGCTCAACACTAATGACATGAGCCAATGTCGGAGGCCAAATTGGTGTATATCACCTGACATGTGTGTGATGTGTGGTGAGGATTGTGAGACGGCTTCTCATTTGTTTTTACACTGCCGTGTGGCCTGGGTGCTTAGGTCTAGGCTCTTTGGTGTTCAGGGTGAGGCCTTGATCTGTCCCACTTCTGTCCTTGATTTTTTGCAGTGTGGGGGTTTTGGTAGGGGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_130219.p1 GENE.S_Transcript_130219~~S_Transcript_130219.p1 ORF type:5prime_partial len:103 (+),score=16.09,zf-RVT|PF13966.2|3.8e-13 S_Transcript_130219:1-309(+)
AFPIAKIIWKAKAHLEVQAFVWILALGKLNTNDMSQCRRPNWCISPDMCVMCGEDCETASHLFLHCRVAWVLRSRLFGVQGEALICPTSVLDFLQCGGFGRG*

Click here to download the sequence:
Link to NCBI Protein BLAST