Transcript Information: S_Transcript_1303.p2


Annotated TAIR IDAT1G16040.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI biosynthesis protein Pig-F (InterPro:IPR009580); Has 280 Blast hits to 280 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 111; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5504747-5506456 | Forward length=226
E-Value4.7E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.088750514658
Replicate 27.6885478761036
Replicate 37.4050379729608
Condition 2: 8 Hour
Replicate 18.8855792988054
Replicate 210.846956916231
Replicate 310.334956414536
Condition 3: 24 Hour
Replicate 15.2957293310531
Replicate 27.8979949432726
Replicate 38.789500322995


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_1303.p2 GENE.S_Transcript_1303~~S_Transcript_1303.p2 ORF type:complete len:132 (+),score=15.95,PIG-F|PF06699.7|2.8e-23 S_Transcript_1303:415-810(+)
ATGCTCGTATTTGAAGGCGGTAGGACGGGGGCTATTGGGGCTTGTTGCAGGGGCGATGGTGATCGCACTAGGAGCTATTACCTTGGGTGCACCCGTTGGCACAAATTTGCACCTGCTGCATCCGTTTTCGGTTCATCTTGGGTAGATTGGCAACGTATATTTGCAGACACCAGGCCAGCTGGATGTGTTGATTATATGGTCTGTCTTCCCGCACATGGTGCCCTTATTGGGTCTTGGTTTGGAGCTTGGCCTATGCCACTTGATTGGGAGAGGCCATGGCAGGAATGGCTTATTTGTGTGACCTATGGAGCAATGGCTGGCTATGCGATTGGCATGGTAGCATCCCTCCTATTTCCACTTCACAATGGCAGGAGGCTGCATACAAAAGAAGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_1303.p2 GENE.S_Transcript_1303~~S_Transcript_1303.p2 ORF type:complete len:132 (+),score=15.95,PIG-F|PF06699.7|2.8e-23 S_Transcript_1303:415-810(+)
MLVFEGGRTGAIGACCRGDGDRTRSYYLGCTRWHKFAPAASVFGSSWVDWQRIFADTRPAGCVDYMVCLPAHGALIGSWFGAWPMPLDWERPWQEWLICVTYGAMAGYAIGMVASLLFPLHNGRRLHTKEE*

Click here to download the sequence:
Link to NCBI Protein BLAST