Transcript Information: S_Transcript_130335.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.080890581261947
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_130335.p2 GENE.S_Transcript_130335~~S_Transcript_130335.p2 ORF type:complete len:329 (-),score=44.31,gag_pre-integrs|PF13976.2|1e+04,gag_pre-integrs|PF13976.2|6.9e-12 S_Transcript_130335:2361-3347(-)
ATGGAGGAGGATGGAAAAACTAGTTGTGGGTCAAATGGTAAGAAAAGATCCAACAAGAAATCTTCTAAGAAGTCCAACAACAAGAAAAACAAGAATGGACCTAGTTGGGAATGCAACAAGTCCAGTCGTTTCAAGAAAGATTGTTGGACTAGGAAGAAGAAAAAGGCTCAATGTCAAGGCCAAGGTCAAGATCAACATGGCCAAGGCGAAAAGTACCAAGGTACAACTGCACATGTTGCTACAAATTCCGAAATGAATTTTGTGGCTGTGATTATTGAAATCAATTGTGTGCAGGATGAGGATCATTCTTGGTGGATTGATTCAGGAGCCTCTAGACATGTGTGTAAAGATCGTAGCATCTTCAAGACCTTTGAATCGGTTGAAGATGGACAAGTTCTTTACATGGGGAACCAGTCTATTGCCCATATTCATGGCAAAGGACAAGTAGAATTACTTTTTACATCCGGAAAGTTGTTAACTTTAAGGGATGTATTGTTTGTTCCCGATATTAGAAAGAATTTAGTGTCTGTAAGCATCTTGAATAGATTTGGTTTCAAGATGGTGTTTGAAGCTGATAAGTTTATTTTATCTAAGGGTGGTGTATTTGTGGGACAAGGTTATCTTTGTAATAGCATGTTTAAACTAAGTATTAATAAAGTTTCTAGTTCTATTTACATGGCTAGTGTAAATGATTCTTTTCTATGGCATTCTCGTCTTGGACATGTAAATTATAGGCGTCTATATGACATGTCTAAGATGGGAATAATTCCTCCTTTTGATATGAATATAGAAAAGTGTAAAACATGCATGGTTACAAAGATTACTCGATTGCCATTTCCTAGTGTGGAAAGAAGTACTTTGTTACTTGATTTGGTGCATAGTGATTTGTGTAACTTTCATAGCACACCTTCTTTAGGAAACAAGAAATATGTTGTAACTTTTATTGATGATAGCACTCGTTTTTGCTATGTATATCTCTTGTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_130335.p2 GENE.S_Transcript_130335~~S_Transcript_130335.p2 ORF type:complete len:329 (-),score=44.31,gag_pre-integrs|PF13976.2|1e+04,gag_pre-integrs|PF13976.2|6.9e-12 S_Transcript_130335:2361-3347(-)
MEEDGKTSCGSNGKKRSNKKSSKKSNNKKNKNGPSWECNKSSRFKKDCWTRKKKKAQCQGQGQDQHGQGEKYQGTTAHVATNSEMNFVAVIIEINCVQDEDHSWWIDSGASRHVCKDRSIFKTFESVEDGQVLYMGNQSIAHIHGKGQVELLFTSGKLLTLRDVLFVPDIRKNLVSVSILNRFGFKMVFEADKFILSKGGVFVGQGYLCNSMFKLSINKVSSSIYMASVNDSFLWHSRLGHVNYRRLYDMSKMGIIPPFDMNIEKCKTCMVTKITRLPFPSVERSTLLLDLVHSDLCNFHSTPSLGNKKYVVTFIDDSTRFCYVYLLF*

Click here to download the sequence:
Link to NCBI Protein BLAST