Transcript Information: S_Transcript_130343.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0008
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.30361637005754
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.10020588757153
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_130343.p1 GENE.S_Transcript_130343~~S_Transcript_130343.p1 ORF type:complete len:218 (-),score=23.32,gag_pre-integrs|PF13976.2|4.6e-10,gag_pre-integrs|PF13976.2|2.9e+03 S_Transcript_130343:1253-1906(-)
ATGGGAAATTCTGCAACAGCTCAAGTAGTGGGTAAGGGTAGTGTAGTTTTAAAGTTTACTTCGGATAAGAAGTTAACTTTAAATGATGTATACCATATTCCTGAAATCAGGAAGAATCTTCTATCAGGTTGGCTTCTTAATAAGTTTGGCTTCAAAACTGTATATGAAGTCAATAAAGTTGTAATTTCCAAGGGTGGGATGTTTGTTGGTAAGGCTTATGCTTGTGATTCTATGTTCAAACTCAATGCTGTTGTTAATAAAATAAATGCTTCTGTTTATATTGTTGACTCCTTTTCTTTATGGCATAGTAGATTGGGACATGTTCATTATAAAAGGATGCATGATTTGATGAATCAAAGAATTATTCCTTTTTTTGATAAAGATGAAATCAAGTGTAAAACTCGTATGGTTACTAAAATAACCCGTTCTTCCTTTCCATCTGTTGAGAGAACTTCAAAAGTTCTTGATTTAATACATAGTGATCTATGTGAGTTTAACGGTAGGTTAACCATTGGTTGCAAACGTTATTTTGCAACATTCATGGATGATTATTCAAGATATTGGTATGTTTATCTTTTGAGATCAAAAGATGAGACTTTAGACATGTTTAAAATATTCAAAAATAAAGTTGAACTTATTGTGAATCATTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_130343.p1 GENE.S_Transcript_130343~~S_Transcript_130343.p1 ORF type:complete len:218 (-),score=23.32,gag_pre-integrs|PF13976.2|4.6e-10,gag_pre-integrs|PF13976.2|2.9e+03 S_Transcript_130343:1253-1906(-)
MGNSATAQVVGKGSVVLKFTSDKKLTLNDVYHIPEIRKNLLSGWLLNKFGFKTVYEVNKVVISKGGMFVGKAYACDSMFKLNAVVNKINASVYIVDSFSLWHSRLGHVHYKRMHDLMNQRIIPFFDKDEIKCKTRMVTKITRSSFPSVERTSKVLDLIHSDLCEFNGRLTIGCKRYFATFMDDYSRYWYVYLLRSKDETLDMFKIFKNKVELIVNHL*

Click here to download the sequence:
Link to NCBI Protein BLAST