Transcript Information: S_Transcript_130387.p1


Annotated TAIR IDAT5G46860.1
Annotated Gene NameSyntaxin/t-SNARE family protein
Annotated Gene Symbol(s)VAM3, ATVAM3, SYP22, ATSYP22, SGR3
Annotation TypeHomolog
Chromosome Positionchr5:19012342-19013795 | Reverse length=268
E-Value3E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.489300672487
Replicate 214.871954442473
Replicate 313.86620527767
Condition 2: 8 Hour
Replicate 111.136592721169
Replicate 210.854489525201
Replicate 310.736871386213
Condition 3: 24 Hour
Replicate 114.07781380505
Replicate 213.682226988684
Replicate 311.303212492663


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_130387.p1 GENE.S_Transcript_130387~~S_Transcript_130387.p1 ORF type:complete len:270 (+),score=58.61,Syntaxin_2|PF14523.2|1.1e-29,Syntaxin_2|PF14523.2|1.3e+02,SNARE|PF05739.15|1.7e-12 S_Transcript_130387:224-1033(+)
ATGAGTTTCCAAGATCTGCGTAATGGCGGAAGGCCAGCAACAAGGTCAGCAGCAGCACCTCAAACGCCCTCACAGGCCGTCGCCGCCGGAATTTTCCAGATCAACACCGCCGTCGGCAGTTTCCGCCGCCTTGTCGATTCCATCGGCACCGCCAAAGACACCCCCGACCACCGCCGAAAATTGCACAATACAAGGCAGCGTATAGTGGCGCTGGTCAAGGAGACTGGGGCGAAACTCAAAAGCCTCACTGATTCTGATATTGCTCATGCTGCTGATGTTTCTCAAAACAAAAAAATTGAAGATGCTAAGCTTGCTAGAGATTTTAAAGCAACTTTACAAGAGTTCCAGAAGGTCCAACAGCTTGCCTCTGAGCGTGAATCTACTTACATGCCATCTGGGTCTCTACCTACTGCTGCAACAACCTCTTCCGGTGAAGAGGCAAAACAGGATCTCGAGGGCCAACCTTTCCTGTTAGAGCAAAAGAGGCAAGAGTTGGTGCTTTTGGATAATGAAATTTCATTCAATGAAGCCGTAATTGAGGAGAGGGACCAGGGTATCAAGGACATACAAGAGCAAATTGGTCAAGTTAATGACATATTCAAGGACCTTGCTGTTCTTGTACATGAACAGAGTGTAGTGATTGATGATATTAATTCCAACATTGAGAATTCTGCTGCTGCAACAACCCAAGCGAGACAACAGATCTCTAAAGCTTCTAAGAGTGAAAGAGCAGGTTCAACATGGTGTTGGATGTTGCTGGTGGTGTTTATTGTCGCTATTCTCATCTTCGTGCTTATTCTAATCCTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_130387.p1 GENE.S_Transcript_130387~~S_Transcript_130387.p1 ORF type:complete len:270 (+),score=58.61,Syntaxin_2|PF14523.2|1.1e-29,Syntaxin_2|PF14523.2|1.3e+02,SNARE|PF05739.15|1.7e-12 S_Transcript_130387:224-1033(+)
MSFQDLRNGGRPATRSAAAPQTPSQAVAAGIFQINTAVGSFRRLVDSIGTAKDTPDHRRKLHNTRQRIVALVKETGAKLKSLTDSDIAHAADVSQNKKIEDAKLARDFKATLQEFQKVQQLASERESTYMPSGSLPTAATTSSGEEAKQDLEGQPFLLEQKRQELVLLDNEISFNEAVIEERDQGIKDIQEQIGQVNDIFKDLAVLVHEQSVVIDDINSNIENSAAATTQARQQISKASKSERAGSTWCWMLLVVFIVAILIFVLILIL*

Click here to download the sequence:
Link to NCBI Protein BLAST