Transcript Information: S_Transcript_130389.p2


Annotated TAIR IDAT5G46860.1
Annotated Gene NameSyntaxin/t-SNARE family protein
Annotated Gene Symbol(s)VAM3, ATVAM3, SYP22, ATSYP22, SGR3
Annotation TypeHomolog
Chromosome Positionchr5:19012342-19013795 | Reverse length=268
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.22982072455745
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_130389.p2 GENE.S_Transcript_130389~~S_Transcript_130389.p2 ORF type:complete len:96 (-),score=10.32 S_Transcript_130389:964-1251(-)
ATGCAGGATAAGCATGCACTGCTGATGAATTGCAGCAACTTAGCATCTTCAGTTGCAGCCTATAGGATTAGAATAAGCACGAAGATGAGAATAGCGACAATAAACACCACCAGCAACATCCAACACCATGTTGAACCTGCTCTTTCACTCTTAGAAGCTTTAGAGATCTGTTGTCTCGCTTGGGTTGTTGCAGCAGCAGAATTCTCAATGTTGGAATTAATATCATCAATCACTACACTCTGTTCATGTACAAGAACAGCAAGGTCCTTGAATATGTCATTAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_130389.p2 GENE.S_Transcript_130389~~S_Transcript_130389.p2 ORF type:complete len:96 (-),score=10.32 S_Transcript_130389:964-1251(-)
MQDKHALLMNCSNLASSVAAYRIRISTKMRIATINTTSNIQHHVEPALSLLEALEICCLAWVVAAAEFSMLELISSITTLCSCTRTARSLNMSLT*

Click here to download the sequence:
Link to NCBI Protein BLAST