Transcript Information: S_Transcript_1304.p1


Annotated TAIR IDAT1G16040.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI biosynthesis protein Pig-F (InterPro:IPR009580); Has 280 Blast hits to 280 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 111; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:5504747-5506456 | Forward length=226
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26091177681549
Replicate 20.54075464601752
Replicate 31.3560835355589
Condition 2: 8 Hour
Replicate 10.73175358931339
Replicate 21.4256570211591
Replicate 31.1493839394843
Condition 3: 24 Hour
Replicate 11.070827622088
Replicate 20.66658269342198
Replicate 30.86546230801869


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_1304.p1 GENE.S_Transcript_1304~~S_Transcript_1304.p1 ORF type:5prime_partial len:204 (+),score=-0.57,PIG-F|PF06699.7|1.1e-09 S_Transcript_1304:1-612(+)
CTCCTTTTTTTATTTATATTTTCGAATTCAGTTAGGTTGCCGATTTTACTTATTGGAACTGCAGATAGAAGATCAGGAACTATTCATTTGCACATTTCGGTTGATTGGTTTTGGAATGTGACGGTGATGTCATCAACATTTGGTGTTTTATCGTTGCATTTGTTATGTGGATTGGGTTTAGGGTCAGCTTTCTTAGTGGCCAATCATATCTACCATATCAATCTCATATCGGATCCTGAAACTATGCTGCTTATATCTTGGGTCATTGAGTGCCCAATTGTAACCCTACTTTATAGTCTTTTCAGGAAAAATCCAGCAAAATGCTCGTATTTGAAGGCGGTAGGACGGGGGCTATTGGGGCTTGTTGCAGGGGCGATGGTGATCGCACTAGGAGCTATTACCTTGGGTGCACCCGTTGGCACAAATTATCTGTGGAGGACACTATACTGGTCCCTTCTGATGTCATTGTTTACAGTTAAGTCTTCCTGTATGCCGTATATGCTTCATCAAGGCAGAATATTTTTTTCTGCGATCTTTTTACCTAGTGCTATCCTGTTGCTAGCTGGGCAGATTTGCCAATTCAACTGTTGGCTCACCGTGTCCCCTATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_1304.p1 GENE.S_Transcript_1304~~S_Transcript_1304.p1 ORF type:5prime_partial len:204 (+),score=-0.57,PIG-F|PF06699.7|1.1e-09 S_Transcript_1304:1-612(+)
LLFLFIFSNSVRLPILLIGTADRRSGTIHLHISVDWFWNVTVMSSTFGVLSLHLLCGLGLGSAFLVANHIYHINLISDPETMLLISWVIECPIVTLLYSLFRKNPAKCSYLKAVGRGLLGLVAGAMVIALGAITLGAPVGTNYLWRTLYWSLLMSLFTVKSSCMPYMLHQGRIFFSAIFLPSAILLLAGQICQFNCWLTVSPI*

Click here to download the sequence:
Link to NCBI Protein BLAST