Transcript Information: S_Transcript_130449.p1


Annotated TAIR IDAT3G07590.1
Annotated Gene NameSmall nuclear ribonucleoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2423146-2423958 | Forward length=114
E-Value3.5E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 170.264814236788
Replicate 256.636795144596
Replicate 355.778031082109
Condition 2: 8 Hour
Replicate 172.948438828729
Replicate 264.660099117259
Replicate 373.435694492771
Condition 3: 24 Hour
Replicate 148.351784799303
Replicate 252.6519037231
Replicate 350.905467671301


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_130449.p1 GENE.S_Transcript_130449~~S_Transcript_130449.p1 ORF type:5prime_partial len:164 (+),score=21.22,LSM|PF01423.18|1.8e-17 S_Transcript_130449:3-494(+)
CTGGGTGTGTTCATGCTAAAATCTTCCCCTCCTTCCCGCTCAGTTATTTTACTTATTTTCGCTTTCTCGCTACTCTTCAGGCTCAAAAGCCCTAAACACCACAACCACCAGCACAGTTCCCCTCACCCTCTCATCGCAACGAAAATGAAGCTCGTACGGTTTTTGATGAAATTGAACAACGAGACTGTCTCCATTGAGCTCAAGAATGGCACTGTTGTTCACGGAACTATTACAGGTGTTGATATTAGCATGAACACACACTTGAAGACAGTCAAACTCACACCAAAAGGAAAAAATCCTGTAACTATGGATCACTTGAGCGTGCGTGGGAACAATATTCGATACTACATTCTTCCTGACAGCTTGAATCTTGAAACCTTGCTTGTGGAGGAGACACCGAGGGTCAAACCAAAGAAGGCAGCTGCTGGAAGACCTGCTGTGGGACGTGGAAGAGGTCGGGGCCGTGGGCGTGGACGTGCTCGTGGTCGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_130449.p1 GENE.S_Transcript_130449~~S_Transcript_130449.p1 ORF type:5prime_partial len:164 (+),score=21.22,LSM|PF01423.18|1.8e-17 S_Transcript_130449:3-494(+)
LGVFMLKSSPPSRSVILLIFAFSLLFRLKSPKHHNHQHSSPHPLIATKMKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTPKGKNPVTMDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKAAAGRPAVGRGRGRGRGRGRARGR*

Click here to download the sequence:
Link to NCBI Protein BLAST