Transcript Information: S_Transcript_130720.p1


Annotated TAIR IDAT5G13260.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4243164-4246677 | Forward length=537
E-Value2E-131
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.376834095062
Replicate 29.1217583716784
Replicate 38.8649117981677
Condition 2: 8 Hour
Replicate 115.841718521299
Replicate 215.265496718872
Replicate 318.127426702724
Condition 3: 24 Hour
Replicate 16.6452502719287
Replicate 28.5703489154255
Replicate 310.427937686821


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_130720.p1 GENE.S_Transcript_130720~~S_Transcript_130720.p1 ORF type:complete len:595 (+),score=130.96 S_Transcript_130720:703-2487(+)
ATGGAGACAAAGCAGCGAACGGAAAGCCCGATCTACGCAAGGAGGTGGACTTCAGAGCCTACGGTGGCGCGTGGTCTTCACTCTCGTTCATCATCAACAGTAGACTCCCCAACATCATCGCCATTGCGTGGACACCACTCTCGGACTTCTTCCACAACAAGCATTTCCAATGTCAAGCGCACTCAGAACTTCGCTGCAAGAGCTGCCGCCCAACGCCTTGCTCAAGTCATGGCTTCTCAGACTACCGACGACGACAACGATGAAGCTGATGACGCTGATCTCGGATTTCGTTACGCTTATGCTCCTGCCCTTGCATTGTCCCTTAGAAGCAATAATAATAACATTAGCAATAGCAATAGCAATGACAATGTCAGTGGCAAAACCAAGCCCTTGCTCCCTTCCTCTGCTAAGACGTCCGCTACCACTAACAGCACCAGATCTCCTTCTCCTGCTTCTTCAGCGAGGAGCTCAGTAGATGAAACGCCGTCGTTTCGCTCAGCATCAAACGGAAGAGCAGCTGCATCAGCAGCTGCACTGGGAGTAGGAGTGGCATCAGTGCGGACGGGTGCAGCAAAAGCAGTACCGCCAAACCCCAACGTTGCAGCTTTGAAAACCCAAGCTTCTCTCCCACCCCTTGATTCCCCTACTCTTAGGAATAATCATATTAAAGACCCCCGAAGATTCTTTGCAGATAAAGGACAAAACAATGTAAAAGATGTAGGATGTCAGCAGGAAACCTCTGCACTACGTGATGAACTTGATATGCTACAAGAAGAGAACAATAGTATACTTGGAAAGCTTAGAGCTGAAGAAGACAAATGCAAGCAAGTAGAGGCTAGAGTCAAAGAGCTTGAAAAACAGGTTGGCGCTCTTGGGGAGGGAGTCTCTTTAGAAGCTAAATTGCTGAGCAGAAAAGAAGCAGCATTGCGTCAAAGAGAGGCTGCACTGAGAGATGAAAAGCAATCAAAAGACAGCATTAACACAGAAATAGCTATTCTTCGCTCCCAAGCTACGAATGCAAAACATGACGTTGAAACAGCTGCATCACGGCTCCAGGGAGCTGAATCTGAAGTTAAGTCTCTCCGTACAATGACAGAAAGAATGGTTCTTACCCAGAAAGAAATGGAAGAAGTTGTTCTTAAGAGATGTTGGCTTGCACGTTATTGGGGTTTAGCTGCACAGCTTGGCATCTGTGCAGATATTGCTACGTCTAAGTATGAACACTGGTCATCACTAGCTCCTCTTCCTTTTGAAGTTGTTGTTTCAGCTGGGCAAAAGGCTAAAGAGGGAAACTGGGAAAAAGGTGATGAAGACCCTGACAGTAAAAGCAGACTTGTACAAGACTTGAATGATCTCACTGGAGAGGGAAATATCGAGAGTATGCTTTCTGTTGAGATGGGATTGAAGGAACTAGCTTTTCTGAAGGTTGAAGAATCCATTGCATATGCATTTGCTCAGCTTCGGCGTCCAAATTCTTCTAGATTGTCCATCTCAGATCTATCTCCAGGAGATGTCAAGTATCTGGAGGCCTTTGAGTTAAGTCTGGAGGAGTCTGAAGATGTTCTTTTCAAAGAGGCATGGCTGACATATTTCTGGAGAAGAGCTTTTACTCTTAGCATAGAAAAGGACATCGCTAAAGAAAGACTTCAATTTTGGATTGGTCGAAGCCGACATTCACCTACTTCACATGACGCAGTTGATGTTGACCAAGGCTTAACTGAGCTGAGAAAATTAGGGATTGAACGTCGTCTGTGGGAAGCATCTCGCAAAGATAGTGTTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_130720.p1 GENE.S_Transcript_130720~~S_Transcript_130720.p1 ORF type:complete len:595 (+),score=130.96 S_Transcript_130720:703-2487(+)
METKQRTESPIYARRWTSEPTVARGLHSRSSSTVDSPTSSPLRGHHSRTSSTTSISNVKRTQNFAARAAAQRLAQVMASQTTDDDNDEADDADLGFRYAYAPALALSLRSNNNNISNSNSNDNVSGKTKPLLPSSAKTSATTNSTRSPSPASSARSSVDETPSFRSASNGRAAASAAALGVGVASVRTGAAKAVPPNPNVAALKTQASLPPLDSPTLRNNHIKDPRRFFADKGQNNVKDVGCQQETSALRDELDMLQEENNSILGKLRAEEDKCKQVEARVKELEKQVGALGEGVSLEAKLLSRKEAALRQREAALRDEKQSKDSINTEIAILRSQATNAKHDVETAASRLQGAESEVKSLRTMTERMVLTQKEMEEVVLKRCWLARYWGLAAQLGICADIATSKYEHWSSLAPLPFEVVVSAGQKAKEGNWEKGDEDPDSKSRLVQDLNDLTGEGNIESMLSVEMGLKELAFLKVEESIAYAFAQLRRPNSSRLSISDLSPGDVKYLEAFELSLEESEDVLFKEAWLTYFWRRAFTLSIEKDIAKERLQFWIGRSRHSPTSHDAVDVDQGLTELRKLGIERRLWEASRKDSVF*

Click here to download the sequence:
Link to NCBI Protein BLAST