Transcript Information: S_Transcript_130723.p1


Annotated TAIR IDAT5G13260.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4243164-4246677 | Forward length=537
E-Value4E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7742000823454
Replicate 22.0931364452001
Replicate 32.0334298758842
Condition 2: 8 Hour
Replicate 11.3670121998162
Replicate 22.6387308651985
Replicate 33.1700491309972
Condition 3: 24 Hour
Replicate 11.1202504354151
Replicate 21.2203590848802
Replicate 32.0048291706631


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_130723.p1 GENE.S_Transcript_130723~~S_Transcript_130723.p1 ORF type:complete len:390 (+),score=73.28 S_Transcript_130723:721-1890(+)
ATGGAGACAAAGCAGCGAACTGAAAGCCCGATCTACCCAAGGAGGTGGACTTCAGAGCCCACGGTGGCGCGTGCTCTTCACTCTCGGACATCATCAACAGTAGACTCTCCAACATCATCGCCATTGCGTGGACACCACTCTCGGACTTCTTCCACAACAAGCATTTCCAATGTCAAGCGCACTCAGAACTTCGCTGCAAGAGCTGCCGCCCAACGCCTTGCTCAAGTCATGGCTTCTCAGACCACCGACGATGACGACGACGACAACGATGAACCCGATGACGCTGATCTCGGATTTCGTTACGCTTATGCTCCTGCCCCTGCATTGTCCCGTAGAAGCAATAATAATAGCATTAGCGTTAGCAATGTCAATGGCAAAACCAAGCCCTTGCTCCCTTCCTCTGCTAAGACGTCCGCTACCACTAACAGCACCAGATCTCCTTCTCCTGCTTCTTCAGCGAGGAGCTCAGTAGATGAAACGCCGTCGTTTCGCTCAGCATCAAACGGAAGAGCAGCTGCATCAGCAGCTGCACTGGGAGTAGGAGTGGCATCAGTGCGGACGGGTGCAGCAAAAGCAGTACCGCCAAACCCCAACGTTGCAGCTTTGAAAACCCAAGCTTCTCTCCCACCCCTTGATTCCCCTACTCTTAGGAATAATCATATTAAAGACCCCCGAAGATTCTTTGCAGATAAAGGACAAAACAATGTAAAAGATGTAGGATGTCAGCAGGAAACCTCTGCACTACGTGATGAACTTGATATGCTACAAGAAGAGAACAATAGTATACTTGGAAAGCTTAGAGCTGAAGAAGACAAATGCAAGCAAGTAGAGGCTAGAGTCAAAGAGCTTGAAAAACAGGTTGGCGCTCTTGGGGAGGGAGTCTCTTTAGAAGCTAAATTGCTGAGCAGAAAAGAAGCAGCATTGCGTCAAAGAGAGGCTGCACTGAGAGATGAAAAGCAATCAAAAGACAGCATTAACACAGAAATAGCTATTCTTCGCTCCCAAGCTACGAATGCAAAACATGACGTTGAAACAGCTGCATCACGGCTCCAGGGAGCTGAATCTGAAGTTAAGTCTCTCCGTACAATGACAGAAAGAATGGTTCTTACCCAGAAAGAAATGGTCTGTATTTTCCTTGGTGTTTCACAGTACATTACATTTGGAAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_130723.p1 GENE.S_Transcript_130723~~S_Transcript_130723.p1 ORF type:complete len:390 (+),score=73.28 S_Transcript_130723:721-1890(+)
METKQRTESPIYPRRWTSEPTVARALHSRTSSTVDSPTSSPLRGHHSRTSSTTSISNVKRTQNFAARAAAQRLAQVMASQTTDDDDDDNDEPDDADLGFRYAYAPAPALSRRSNNNSISVSNVNGKTKPLLPSSAKTSATTNSTRSPSPASSARSSVDETPSFRSASNGRAAASAAALGVGVASVRTGAAKAVPPNPNVAALKTQASLPPLDSPTLRNNHIKDPRRFFADKGQNNVKDVGCQQETSALRDELDMLQEENNSILGKLRAEEDKCKQVEARVKELEKQVGALGEGVSLEAKLLSRKEAALRQREAALRDEKQSKDSINTEIAILRSQATNAKHDVETAASRLQGAESEVKSLRTMTERMVLTQKEMVCIFLGVSQYITFGS*

Click here to download the sequence:
Link to NCBI Protein BLAST