Transcript Information: S_Transcript_1308.p2


Annotated TAIR IDAT1G16040.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI biosynthesis protein Pig-F (InterPro:IPR009580); Has 280 Blast hits to 280 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 111; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5504747-5506456 | Forward length=226
E-Value9.8E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3761608245697
Replicate 22.1668811172559
Replicate 32.1406747239893
Condition 2: 8 Hour
Replicate 12.6656737896416
Replicate 22.1972351342589
Replicate 33.4257612222291
Condition 3: 24 Hour
Replicate 12.3405232311351
Replicate 22.023554605031
Replicate 32.9275587255938


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_1308.p2 GENE.S_Transcript_1308~~S_Transcript_1308.p2 ORF type:complete len:112 (+),score=8.89,PIG-F|PF06699.7|3e-15 S_Transcript_1308:321-656(+)
ATGCTCGTATTTGAAGGCGGTAGGACGGGGGCTATTGGGGCTTGTTGCAGGGGCGATGGTGATCGCACTAGGAGCTATTACCTTGGGTGCACCCGTTGGCACAAATTTGCACCTGCTGCATCCGTTTTCGGTTCATCTTGGGTAGATTGGCAACGTATATTTGCAGACACCAGGCCAGCTGGATGTGTTGATTATATGGTCTGTCTTCCCGCACATGGTGCCCTTATTGGGTCTTGGTTTGGAGCTTGGCCTATGCCACTTGATTGGGAGAGGCCATGGCAGGTAATTTCATTTTTGTTAGCTTATGCTGCGTCACTTTTTCCTCTCTTCGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_1308.p2 GENE.S_Transcript_1308~~S_Transcript_1308.p2 ORF type:complete len:112 (+),score=8.89,PIG-F|PF06699.7|3e-15 S_Transcript_1308:321-656(+)
MLVFEGGRTGAIGACCRGDGDRTRSYYLGCTRWHKFAPAASVFGSSWVDWQRIFADTRPAGCVDYMVCLPAHGALIGSWFGAWPMPLDWERPWQVISFLLAYAASLFPLFD*

Click here to download the sequence:
Link to NCBI Protein BLAST