Transcript Information: S_Transcript_1309.p1


Annotated TAIR IDAT1G16040.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI biosynthesis protein Pig-F (InterPro:IPR009580); Has 280 Blast hits to 280 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 111; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5504747-5506456 | Forward length=226
E-Value2.8E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8178471896073
Replicate 25.1047238584054
Replicate 32.7483292987326
Condition 2: 8 Hour
Replicate 16.2721736226862
Replicate 21.7546547952727
Replicate 33.3436623694088
Condition 3: 24 Hour
Replicate 14.5403091176529
Replicate 23.9106184680756
Replicate 35.2422288371418


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_1309.p1 GENE.S_Transcript_1309~~S_Transcript_1309.p1 ORF type:5prime_partial len:255 (+),score=19.35,PIG-F|PF06699.7|4.5e-39 S_Transcript_1309:1-765(+)
CTCCTTTTTTTATTTATATTTTCGAATTCAGTTAGGTTGCCGATTTTACTTATTGGAACTGCAGATAGAAGATCAGGAACTATTCATTTGCACATTTCGGTTGATTGGTTTTGGAATGTGACGGTGATGTCATCAACATTTGGTGTTTTATCGTTGCATTTGTTATGTGGATTGGGTTTAGGGTCAGCTTTCTTAGTGGCCAATCATATCTACCATATCAATCTCATATCGGATCCTGAAACTATGCTGCTTATATCTTGGGTCATTGAGTGCCCAATTGTAACCCTACTTTATAGTCTTTTCAGGAAAAATCCAGCAAAATGCTCGTATTTGAAGGCGGTAGGACGGGGGCTATTGGGGCTTGTTGCAGGGGCGATGGTGATCGCACTAGGAGCTATTACCTTGGGTGCACCCGTTGGCACAAATTATCTGTGGAGGACACTATACTGGTCCCTTCTGATGTCATTGTTTACATTTGCACCTGCTGCATCCGTTTTCGGTTCATCTTGGGTAGATTGGCAACGTATATTTGCAGACACCAGGCCAGCTGGATGTGTTGATTATATGGTCTGTCTTCCCGCACATGGTGCCCTTATTGGGTCTTGGTTTGGAGCTTGGCCTATGCCACTTGATTGGGAGAGGCCATGGCAGGAATGGCTTATTTGTGTGACCTATGGAGCAATGGCTGGCTATGCGATTGGCATGGTAGCATCCCTCCTATTTCCACTTCACAATGGCAGGAGGCTGCATACAAAAGAAGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_1309.p1 GENE.S_Transcript_1309~~S_Transcript_1309.p1 ORF type:5prime_partial len:255 (+),score=19.35,PIG-F|PF06699.7|4.5e-39 S_Transcript_1309:1-765(+)
LLFLFIFSNSVRLPILLIGTADRRSGTIHLHISVDWFWNVTVMSSTFGVLSLHLLCGLGLGSAFLVANHIYHINLISDPETMLLISWVIECPIVTLLYSLFRKNPAKCSYLKAVGRGLLGLVAGAMVIALGAITLGAPVGTNYLWRTLYWSLLMSLFTFAPAASVFGSSWVDWQRIFADTRPAGCVDYMVCLPAHGALIGSWFGAWPMPLDWERPWQEWLICVTYGAMAGYAIGMVASLLFPLHNGRRLHTKEE*

Click here to download the sequence:
Link to NCBI Protein BLAST