Transcript Information: S_Transcript_130904.p1


Annotated TAIR IDAT3G54020.1
Annotated Gene NameArabidopsis Inositol phosphorylceramide synthase 1
Annotated Gene Symbol(s)AtIPCS1
Annotation TypeHomolog
Chromosome Positionchr3:20006098-20008020 | Forward length=305
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1570870102252
Replicate 22.7178798730272
Replicate 31.3364301509856
Condition 2: 8 Hour
Replicate 11.5453181389227
Replicate 23.8907562851699
Replicate 31.5446266380421
Condition 3: 24 Hour
Replicate 10.31659251435644
Replicate 21.1496136306843
Replicate 31.6449159394641


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_130904.p1 GENE.S_Transcript_130904~~S_Transcript_130904.p1 ORF type:5prime_partial len:138 (+),score=6.54,PAP2_C|PF14360.2|1.2e-06 S_Transcript_130904:3-416(+)
CGTTTCCCCGCGTTTCCCCGCGTTTCCCGTACCCGCTGCGTTTCTGGTACGGGAGACGCCCCTTCCCCCGCGTTTCCGTGCATCAGAGCTTCTCGCAAACATTATACTGTAGATGTGGTTGTAGCGTGGTATACCGTCAATCTTGTTGTTTTCTTTGTTGATAACAATCTGCCAGAAATGCCCGAACGGTCCACTGGTGCAACTCTTTTACTGCCATTGAGCAAAAAAGACAAGGATAGCAAAAACAAGAAGGAAAACCATGTGCTCGTAAATGGAACGTCTGGCGATCAACAGGAACGGAGGCAAAGAACTGGAAGCTATGGCAAGCTTCAGCTTCTCGTAATGGAGGATGGAGCAGTGCATAGTGATGCTGCTACTAGTGAAAGTTTGTCCTTTGGATCATTGAACGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_130904.p1 GENE.S_Transcript_130904~~S_Transcript_130904.p1 ORF type:5prime_partial len:138 (+),score=6.54,PAP2_C|PF14360.2|1.2e-06 S_Transcript_130904:3-416(+)
RFPAFPRVSRTRCVSGTGDAPSPAFPCIRASRKHYTVDVVVAWYTVNLVVFFVDNNLPEMPERSTGATLLLPLSKKDKDSKNKKENHVLVNGTSGDQQERRQRTGSYGKLQLLVMEDGAVHSDAATSESLSFGSLNE*

Click here to download the sequence:
Link to NCBI Protein BLAST