Transcript Information: S_Transcript_130910.p1


Annotated TAIR IDAT2G29525.1
Annotated Gene NameArabidopsis Inositol phosphorylceramide synthase 3
Annotated Gene Symbol(s)AtIPCS3
Annotation TypeHomolog
Chromosome Positionchr2:12638533-12640661 | Forward length=289
E-Value3E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5146142899383
Replicate 22.4321185338993
Replicate 31.7426207323087
Condition 2: 8 Hour
Replicate 13.0224962654204
Replicate 22.6423443275268
Replicate 33.0211437550367
Condition 3: 24 Hour
Replicate 11.8920765228074
Replicate 22.6768281389387
Replicate 32.5817840729646


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_130910.p1 GENE.S_Transcript_130910~~S_Transcript_130910.p1 ORF type:5prime_partial len:127 (+),score=5.39,PAP2_C|PF14360.2|8.4e-13 S_Transcript_130910:1-381(+)
TGGGGACGGAAACGGAAACTGTTGCGGGTACGGAAACGGGGACGGGGAAACGGCAAAGTCCAAAAATCAAGAAACGGGTGTATCAAGCAGTTCGGTTGGCTACTTGTTGTGGTTCAGAGCTTATTGATCATAGCTTCACGCAAACATTATACTGTAGATGTGGTTGTAGCATGGTATATCGTCAATCTAGTGGTTTTCTTCGTTGACAACAATCTGCCAGAAATGCCCGAACGGTCCACTGGTGCAACTCTTTTACTGCCATTGAGCAACAAAGACAAGCATAGCAAAAACAAGGAGGAACACCATGTGCTCGTAAATGGAAACTCTCGCGATCAACAGGAACAGGCAAAGAACTGGATGGTAAGCTTCAGCTTCTCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_130910.p1 GENE.S_Transcript_130910~~S_Transcript_130910.p1 ORF type:5prime_partial len:127 (+),score=5.39,PAP2_C|PF14360.2|8.4e-13 S_Transcript_130910:1-381(+)
WGRKRKLLRVRKRGRGNGKVQKSRNGCIKQFGWLLVVVQSLLIIASRKHYTVDVVVAWYIVNLVVFFVDNNLPEMPERSTGATLLLPLSNKDKHSKNKEEHHVLVNGNSRDQQEQAKNWMVSFSFS*

Click here to download the sequence:
Link to NCBI Protein BLAST