Transcript Information: S_Transcript_130914.p1


Annotated TAIR IDAT1G11910.1
Annotated Gene Nameaspartic proteinase A1
Annotated Gene Symbol(s)APA1, ATAPA1
Annotation TypeOrtholog
Chromosome Positionchr1:4017119-4019874 | Reverse length=506
E-Value6.2E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3535307214785
Replicate 24.0523491024007
Replicate 34.3911276389525
Condition 2: 8 Hour
Replicate 12.9014136485895
Replicate 24.2613045028051
Replicate 35.0752018107098
Condition 3: 24 Hour
Replicate 14.1609301886846
Replicate 24.9336188465518
Replicate 37.0347198680936


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_130914.p1 GENE.S_Transcript_130914~~S_Transcript_130914.p1 ORF type:5prime_partial len:147 (+),score=18.17,Asp|PF00026.19|4.2e-18 S_Transcript_130914:2-442(+)
TTATCTTTTGACTACATACAATCCAATAACAAAGATATGGGCTACAAGAATTTCTTCCTCATTTTCTTTCATTGGCCATTATTGGTGATAACTTGTTTTCTTTCTCTGACAACTGATGGTCTTGTGAGGATTAGTCTTAGGAGGCTTCCTACAGATGCAACAAGTCAAGAGTGTGTTAAGGGAATTGTAGCAAACTATGTTGATTCAAGTAGTGCTGAAATAATATATCTCAAGAATTATATGAATACACAATACTATGGAGAGATTGGAATTGGCACCCCACCTCAGAAATTTTCTGTTATCTTTGATACTGGAGTCTCCAATCTTTGGATCCCTTCTTCAAAATGCAATTCTATGACATGTATTCTGCATTCCAAGTACAACTCAACAAGTCCAGAACATTCACCAAGATTGGTAATGTTCACTGCTACACTATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_130914.p1 GENE.S_Transcript_130914~~S_Transcript_130914.p1 ORF type:5prime_partial len:147 (+),score=18.17,Asp|PF00026.19|4.2e-18 S_Transcript_130914:2-442(+)
LSFDYIQSNNKDMGYKNFFLIFFHWPLLVITCFLSLTTDGLVRISLRRLPTDATSQECVKGIVANYVDSSSAEIIYLKNYMNTQYYGEIGIGTPPQKFSVIFDTGVSNLWIPSSKCNSMTCILHSKYNSTSPEHSPRLVMFTATLS*

Click here to download the sequence:
Link to NCBI Protein BLAST