Transcript Information: S_Transcript_130916.p1


Annotated TAIR IDAT1G11910.1
Annotated Gene Nameaspartic proteinase A1
Annotated Gene Symbol(s)APA1, ATAPA1
Annotation TypeOrtholog
Chromosome Positionchr1:4017119-4019874 | Reverse length=506
E-Value6.6E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.745785841725
Replicate 25.4281466371663
Replicate 35.5620950093399
Condition 2: 8 Hour
Replicate 13.21573346052
Replicate 26.9246198170582
Replicate 33.2142944801162
Condition 3: 24 Hour
Replicate 16.5881394654173
Replicate 27.5546038587825
Replicate 33.0026243339424


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_130916.p1 GENE.S_Transcript_130916~~S_Transcript_130916.p1 ORF type:5prime_partial len:126 (+),score=13.33,Asp|PF00026.19|4.1e+03,Asp|PF00026.19|9.3e-15 S_Transcript_130916:2-379(+)
TTATCTTTTGACTACATACAATCCAATAACAAAGATATGGGCTACAAGAATTTCTTCCTCATTTTCTTTCATTGGCCATTATTGGTGATAACTTGTTTTCTTTCTCTGACAACTGATGGTCTTGTGAGGATTAGTCTTAGGAGGCTTCCTACAGATGCAACAAGTCAAGAGTGTGTTAAGGGAATTGTAGCAAACTATGTTGATTCAAGTAGTGCTGAAATAATATATCTCAAGAATTATATGAATACACAATACTATGGAGAGATTGGAATTGGCACCCCACCTCAGAAATTTTCTGTTATCTTTGATACTGGAGTCTCCAATCTTTGGATCCCTTCTTCAAAATGCAATTCTGTAAGTTTTACAATACGCTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_130916.p1 GENE.S_Transcript_130916~~S_Transcript_130916.p1 ORF type:5prime_partial len:126 (+),score=13.33,Asp|PF00026.19|4.1e+03,Asp|PF00026.19|9.3e-15 S_Transcript_130916:2-379(+)
LSFDYIQSNNKDMGYKNFFLIFFHWPLLVITCFLSLTTDGLVRISLRRLPTDATSQECVKGIVANYVDSSSAEIIYLKNYMNTQYYGEIGIGTPPQKFSVIFDTGVSNLWIPSSKCNSVSFTIRL*

Click here to download the sequence:
Link to NCBI Protein BLAST