Transcript Information: S_Transcript_130925.p1


Annotated TAIR IDAT1G11910.1
Annotated Gene Nameaspartic proteinase A1
Annotated Gene Symbol(s)APA1, ATAPA1
Annotation TypeOrtholog
Chromosome Positionchr1:4017119-4019874 | Reverse length=506
E-Value1.2E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9570001372423
Replicate 21.8385657964596
Replicate 33.2445554221149
Condition 2: 8 Hour
Replicate 13.3567744017709
Replicate 22.4857609599696
Replicate 31.9736895930538
Condition 3: 24 Hour
Replicate 13.640813915099
Replicate 26.2955032156521
Replicate 33.7365991711283


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_130925.p1 GENE.S_Transcript_130925~~S_Transcript_130925.p1 ORF type:5prime_partial len:108 (-),score=8.63,Asp|PF00026.19|5.8e-21 S_Transcript_130925:190-513(-)
GGTGTTAAGGGAATTGTAGCAAATTATGTTGATTCAGGTAGCGCTGAAATAATATATCTCAAGAATTACATGAATGCACAATACTATGGAGAGATTGGAATTGGCACCCCACCTCAGAAATTTTCTGTTATCTTTGATACTGGAGTCTCCAATCTCTGGATCCCTTCTTCAAAATGCAATTCTATGACATGTATTCTGCATTCCAAGTACAACTCAACAAAGTCCAGAACATTCACCAAGATTGGTAATGTTCACTGCTACACTATCTTGATTCATCAACATTTATTCAACCACCTTGTTCAATTCTATTTTTGGATTTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_130925.p1 GENE.S_Transcript_130925~~S_Transcript_130925.p1 ORF type:5prime_partial len:108 (-),score=8.63,Asp|PF00026.19|5.8e-21 S_Transcript_130925:190-513(-)
GVKGIVANYVDSGSAEIIYLKNYMNAQYYGEIGIGTPPQKFSVIFDTGVSNLWIPSSKCNSMTCILHSKYNSTKSRTFTKIGNVHCYTILIHQHLFNHLVQFYFWIS*

Click here to download the sequence:
Link to NCBI Protein BLAST