Transcript Information: S_Transcript_131068.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26821613786856
Replicate 20.098825485140044
Replicate 30.14456792002822
Condition 2: 8 Hour
Replicate 10.14328369753953
Replicate 20.10020984833024
Replicate 30.059674825321896
Condition 3: 24 Hour
Replicate 10.17123648872806
Replicate 20.25379408260187
Replicate 30.056488341332847


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_131068.p1 GENE.S_Transcript_131068~~S_Transcript_131068.p1 ORF type:complete len:1786 (-),score=358.04,RVT_1|PF00078.23|1.5e-26,RVT_3|PF13456.2|1.5e-22,rve|PF00665.22|1.7e-14,RNase_H|PF00075.20|1.6e-07 S_Transcript_131068:323-5680(-)
ATGGTTAGTTGCTCCGAAGAGGGTGAGGAAGAAGAAGAAAAGGAGAATGATGGAGAACAAATATCTCCAGAGAAGTCATCCTACCAACTCAGCCCTGATGCGAAAGTTTTGGCAGTTTTGGATGCACTTCCCTCAAAAATGGATTGGAAACAGGCTTTTCACCTACCTGGGGAGATGCGCCAACAAGTAGCTCTTGCCTTGAACCATCCCGAGCTCTACGCCGACAAGATAGGCAATCCAGAAGAGTTTGTAGAGGCTACCTCTAAATGTGTTTCTTGCAACACCGCATTGGCATTCACCGATGAGGATTTGCTTCTTGGTTCCAAACCTCACAATCGACCCTTGTTCGCGTCTGGCTATATCCGGGAACAAAAAGTCCGTCGCATATTGGTTGATGGGGGCTCTGCTGTCAACATTATGCCAAAGTCGACAATGATGGAGTGTGGAATCAAAATGGAAGAACTGGCCAGGAGTTCGACGGTGATCCAAGGCTTCAACATGGGTAGTCAGCGTGCAATTGGCATGATACGTGTGACTCTTTCTATGGGAGATTTATCTTCAGCGGCGTTGTTTCATGTGATAGACTCGAAGACGTCCTTCAAGCTGCTCCTTGGGCGTCCTTGGCTTCATGAGAACGGAATCGTGGCATCAACCCTTCATCAATGTCTCAAGTACTATCGAGACGGTGAAAGAAAAATCAATGGTGACGTTAAGCCCTTCACTAAGGCAGAAGCTCATTTTGCCGATGCAAAGTTCTTCGAAGAGGAGGTGACGAGTGAGACATTGCCATCAACAATTCCCTCGACTGGAAAGGGAAGAGTAACAGTAGAAAAGTCTGAGCCATCACCTTTTAAAGCAGTTCCCAACTCCGATGAGGGAAAAGAAGCACACTCAAAAGGAAAAAGCAAAGTGGAAGCACAAACTCCTATGTCAAAGAAGTTAGTCCCTGCATTGTCTTCTTCAACTCCAGTATTGCGATACATCCCCAAATCCTGCCGCAAAGATGGAGAGTCACCATTCAAAGAGTGCTCAATGCAAAAGTGGATGCCTAAGGATGTCAAGAAGGTGGATGAAGCAAGTATCCGAGCCTTGAAAAGCCAAGCAATCATCCCAGCTGCTATGACCAATCTACCCCCCTCAAACATGCCTCCACTCTCCGAATTTATCCCTTCCACTACAAAGTTGCTGAAGGAAGAAGGAAAATCAAGGAGCACAACGGGGAACTTTGACTCAAAGGCCTACAAGCTACTAGCAAGATCGGGATATGACTTCAATAACCCAACCCCTATGGGAAAAGTCATCGAAGTTAAGCAGTATGGCTTGAATGATACGCAAAAGAAACTCCAGGAACAAGGAGGGGATATTCGAGCATCAAAGTTAGGACTAGGATATATACCTCCTAAACCTGTAAGGATTTCTGCTCGGCGCAACGAAGGGTCATCTGCAACCCAATACATCACTGCCGAGGAAGTGCCAGAGAACGATGATGAGAATGACATCCACACTCAAAAGGTGTCCGTGTTTGATAGACTTCGTCCAAGCTTGACCAAAAGGACGTCGGTCTTCAACAGAATCGGTGAGCATTCAAGTTCTATAACAAAGGTTGTTCCCCCAAATAAACAAAGAGGTCAAGTTTTCAGAAGGTTGGGTGAACGATCAAGCTCTACAACAGTAGACCTTACATCAACAAAGCCAAAAGGCCGGGTGTTCCAGCGACTAGGCGCTGCAAGGAAGATCACTAAACAGTGGCGTCGTCGATCAAGTCAAGCAACTGCACCATTAGACGGTGTCGAATTTGAAAAGGATGCCACAGAAAGCAAAGTGCCATCTCGAATGAAGCGCTTCTTGGCAGTAGAGGTAAAAAATGGTGAAGTGTTGAAGGCTAAGGGTCATATAATTGTTCACACCAAGCAACAAGGATCCTCACAAGACAATGAAGATGGGAAAGGTGAACATCATGTTCCTTCCTACCATATTTCCGTGCAGGAAACTCCAGAGTCAAACCTCGATAGTGAGGTGGAGCCTAGTGAGGCACCCAAAACTCTTGAGGACGGGGGGCAAGCTACAGTCGATGACTTAAAGGAACTTAATCTTGGCACTCAAGATGAGCCACGCCCAATCTATGTAAGTTCCCTACTTACCCCTACGGAGGAAGATGAGTACTTCAAGCTTCTTTTGAAGTATAAGGATGTCTTTGCATGGAGCTACAAAGAGATGCCCGGACTTGATCCCAGAATTGCAGTCCATCGATTGGCTATCAAGAAAGGTGTATCCCCAAAGAAGCAACCTCAGCGACGTTTTAGGCCAGAGTTGGTCCCTGAAATCGAATCTGAAGTCAATAAGCTTATTGAAGCCGACTTCATTCGCGAGGTCAAGTACCCTACATGGATCGCAAACATTGTCCCTGTCAGAAAGAAAAATGGACAACTTCGTGTTTGTGTAGACTTTAGGGATCTAAATCAAGCATGCCCAAAGGATGATTTCCCGCTACCTGTGACAGAGCTTATGATAGATGCCACAACTGGACATGAAGCCCTTTCTTTCATGGATTGTACTGCTGGATACAATCAAATTCACATGGCGCCTGAGGATCAAGACGCTACAGCTTTTCGCACTCCAAAAGGGATTTTCTGCTACAAAGTGATGCCTTTTGGCTTGAAAAATGCAGGAGCTACTTATCAAAGGGCAATGCAGACCATTTTTGAGGACATGATGCATAAGACCATAGAGTGCTATGTAGATGATGTGGTGGTCAAGTCAAAAAGGCGAGAGGATCATCTCAAAAATCTTCAAGAAATTTTCGAAAGGCTGCGAAAACACCAATTGAAAATGAATCCACTCAAATGTGCATTTGGCGTTACATCAGGAAAGTTCTTAGGTTTCGTGGTAAGGCATAGAGGAATCGAGATCGACCAATCCAAGATCAAGGCGATCCAGAATATGCCGCCTCCAAGGAATTTGAAGGAACTCCGAGGCCTCCAGGGTCGTCTAGCCTATATTCGACAATTCATCTCAAATCTCGCAGGGCGTTGCCATCCTTTCAGCCGTCTCATGAAGAAGGGTGCGCCATTCGAATGGGATGATGTTTGTGATGAGGCTTTCGAAAGCATAAAGAAATACTTGTTGACCCCTCCGGTGCTTGGCGCGCCAATCCCAGGAAAGTCGTTGATCCTTTACATTGCTGCACAAGAACGATCCTTAGGGGCATTGTGTGCACAAGAGAATGAAGATGGGAAGGAAAGAGCGCTCTACTACTTGAGTCGCACACTAGTTGGTGCCGAGTTGAACTACTCTCCAATAGAGAAGATGTGCCTGGCTCTCATCTTTGCTATCCAAAAGTTGAAGCACTACTTTCAAGCCCACACTGTCCATGTGATCTCCAAGGCTGACCCGATCAAGTACATATTGTCGAGGCCAGTTTTATCAGGAAGACTTGCTAAGTGGGCCGTGCTCATCGAACAACATGACATTGTTTATGTCCCGCAAAAGGCTGTGAAGGGACAAGCATTGGCCGACTTCCTTGCAGATCACCCTATTCCAGATGAATGGGAGTTATCTGATGACTTACCTGGGAAAGGGGTGTTCTTTGTTGAAATTCAACCGCCATGGGAAATGTATTTCGATGGTGCAGCGCGTCAAGATGGTGCAGGAGCGGGAGTTATCTTCATTTCTCCTGAAAAGCATGTTCTACCATACTCCTTCACCCTTACTCAGTTATGCTCGAACAATGTTGCTGAGTATCAAGCGCTTATCATGGGTCTTCAAATGGCTCTTGAAATGGGAATCAAAGACCTCGACATTTATGGAGATTCAAAGTTGATAATCAACCAACTCCTCGACGAGTATGAAGTGAAGAAAGATGACTTGGTCCCTTACCACAAGTATGCTTCCCAACTCCTGAACAAGTTCGATATTGTCAAATTAGAACACGTTCCAAGGAGTGCCAATAAGATGGCCGACGCTCTTGCAAATCTCGCAGCCACTTTGGCACTGGGGGCAAAGGAGAACGTGTATGTTCCAGTATGCAATCAATGGGTAGTAGCTCCTCTCAAAGATGATGTTGAAGAAGAAGTCAACGTGATCTCTGTTTATCAAGTTGACAAGGAAGATTGGCGTCAACCTCTCATTGACTACCTCGAGCATGGTAAGTTGCCAAATGATTCAAGGCATAGGACGGAAATTCGACGACGCGCCACTCGTTTTCTTTATTATAAAGGAACGCTCTATCGTCGATCTTTCCTCGGAATTTGGATGCGATGCCTTGGTGAAGAAGAAGCTGCGCAAGTGGTAGAAGAAGCTCACTCAGGAATATGTGGAGCTCATCAAGCTGGTCCAAAACTCTATGACCGAATCAAAAGAATGGGCTACTACTGGCCAACTATGGTGCAGGATTGTATAGACTTTGCAAAGAGATGTGATCCTTGCCAGTTTCATGCAAACTTCATCCACCAACCTCCCGAGCCGCTGCATCCCACAGTGTCATCATGGCCCTTTGAAGCATGGGGACTCGACATAGTTGGACCTCTCACGCCTAAGTCTTCTGTTGGACATGCATTTATTTTGGCTGCAACAGATTACTTCTCCAAATGGGCGGAGGCAATCCCACTTCGTGAAGTCAAGAAAGAAAATGTTGTCGACTTCATTCGAACCCATCTCATATATCGATATGGTACGCCACGATACATCATCACCGACAATGGCAAACAATTCGATAACAATTTGATGACTAGATTGTGTGAGAAATTCAAGTTTGCACAACACAAGTCCTCAATGTACAATGCTCCAGCAAATGGGTTGGCCGAAGCTTTCAACAAGACTCTATGCAATCTTCTAAAGAAAGTTGTTTCAAAGTCCAAGAGAGATTGGCATGAAAAGTTGGGAGAAACTTTGTGGGCATACCGTACCACTTTCAAAACTCCAACAAGATGTACTCCGTATTCCCTTGTGTATGGAGTAGAAGCTGTTTTGCCTTTGGAAATCGAGGTTCCATCACTACGTGTTGCCATCCAAGAGAGTCTCACAGAAGATGAGAAGGACAAGCTCCGCCTTGCAGAATTAGAGGCACTAGATGAAAAGAGGCTTCAAGCACAACAAAGTTTACAATGTTATCAAGCTCGCCTATCTCGAGCATTCAACAAGAAAGTTCGGCCTCGCTCCTTCAAACATGGAGATTTAGTCTTGGCAGTGAGAAGGCCAATCATCCCTTCAAAGAAACCTGGAAGCAAGTTCACTTCTAGGTGGGATGGTCCTTATGTTGTACAAGAAGTTTACACCAATGGTGCCTACAAGATTGTTGATGCAGAAGGACTACGAGTTGGACCGATCAACGGCAAGTTCTTGAAGCGCTACTATCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_131068.p1 GENE.S_Transcript_131068~~S_Transcript_131068.p1 ORF type:complete len:1786 (-),score=358.04,RVT_1|PF00078.23|1.5e-26,RVT_3|PF13456.2|1.5e-22,rve|PF00665.22|1.7e-14,RNase_H|PF00075.20|1.6e-07 S_Transcript_131068:323-5680(-)
MVSCSEEGEEEEEKENDGEQISPEKSSYQLSPDAKVLAVLDALPSKMDWKQAFHLPGEMRQQVALALNHPELYADKIGNPEEFVEATSKCVSCNTALAFTDEDLLLGSKPHNRPLFASGYIREQKVRRILVDGGSAVNIMPKSTMMECGIKMEELARSSTVIQGFNMGSQRAIGMIRVTLSMGDLSSAALFHVIDSKTSFKLLLGRPWLHENGIVASTLHQCLKYYRDGERKINGDVKPFTKAEAHFADAKFFEEEVTSETLPSTIPSTGKGRVTVEKSEPSPFKAVPNSDEGKEAHSKGKSKVEAQTPMSKKLVPALSSSTPVLRYIPKSCRKDGESPFKECSMQKWMPKDVKKVDEASIRALKSQAIIPAAMTNLPPSNMPPLSEFIPSTTKLLKEEGKSRSTTGNFDSKAYKLLARSGYDFNNPTPMGKVIEVKQYGLNDTQKKLQEQGGDIRASKLGLGYIPPKPVRISARRNEGSSATQYITAEEVPENDDENDIHTQKVSVFDRLRPSLTKRTSVFNRIGEHSSSITKVVPPNKQRGQVFRRLGERSSSTTVDLTSTKPKGRVFQRLGAARKITKQWRRRSSQATAPLDGVEFEKDATESKVPSRMKRFLAVEVKNGEVLKAKGHIIVHTKQQGSSQDNEDGKGEHHVPSYHISVQETPESNLDSEVEPSEAPKTLEDGGQATVDDLKELNLGTQDEPRPIYVSSLLTPTEEDEYFKLLLKYKDVFAWSYKEMPGLDPRIAVHRLAIKKGVSPKKQPQRRFRPELVPEIESEVNKLIEADFIREVKYPTWIANIVPVRKKNGQLRVCVDFRDLNQACPKDDFPLPVTELMIDATTGHEALSFMDCTAGYNQIHMAPEDQDATAFRTPKGIFCYKVMPFGLKNAGATYQRAMQTIFEDMMHKTIECYVDDVVVKSKRREDHLKNLQEIFERLRKHQLKMNPLKCAFGVTSGKFLGFVVRHRGIEIDQSKIKAIQNMPPPRNLKELRGLQGRLAYIRQFISNLAGRCHPFSRLMKKGAPFEWDDVCDEAFESIKKYLLTPPVLGAPIPGKSLILYIAAQERSLGALCAQENEDGKERALYYLSRTLVGAELNYSPIEKMCLALIFAIQKLKHYFQAHTVHVISKADPIKYILSRPVLSGRLAKWAVLIEQHDIVYVPQKAVKGQALADFLADHPIPDEWELSDDLPGKGVFFVEIQPPWEMYFDGAARQDGAGAGVIFISPEKHVLPYSFTLTQLCSNNVAEYQALIMGLQMALEMGIKDLDIYGDSKLIINQLLDEYEVKKDDLVPYHKYASQLLNKFDIVKLEHVPRSANKMADALANLAATLALGAKENVYVPVCNQWVVAPLKDDVEEEVNVISVYQVDKEDWRQPLIDYLEHGKLPNDSRHRTEIRRRATRFLYYKGTLYRRSFLGIWMRCLGEEEAAQVVEEAHSGICGAHQAGPKLYDRIKRMGYYWPTMVQDCIDFAKRCDPCQFHANFIHQPPEPLHPTVSSWPFEAWGLDIVGPLTPKSSVGHAFILAATDYFSKWAEAIPLREVKKENVVDFIRTHLIYRYGTPRYIITDNGKQFDNNLMTRLCEKFKFAQHKSSMYNAPANGLAEAFNKTLCNLLKKVVSKSKRDWHEKLGETLWAYRTTFKTPTRCTPYSLVYGVEAVLPLEIEVPSLRVAIQESLTEDEKDKLRLAELEALDEKRLQAQQSLQCYQARLSRAFNKKVRPRSFKHGDLVLAVRRPIIPSKKPGSKFTSRWDGPYVVQEVYTNGAYKIVDAEGLRVGPINGKFLKRYYP*

Click here to download the sequence:
Link to NCBI Protein BLAST