Transcript Information: S_Transcript_1311.p1


Annotated TAIR IDAT1G16040.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI biosynthesis protein Pig-F (InterPro:IPR009580); Has 280 Blast hits to 280 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 111; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:5504747-5506456 | Forward length=226
E-Value4E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.9305245187126
Replicate 22.5457064874056
Replicate 34.6429265665008
Condition 2: 8 Hour
Replicate 11.7895432433958
Replicate 23.5200461146423
Replicate 30.89437122818104
Condition 3: 24 Hour
Replicate 14.3537005558177
Replicate 21.9811024105199
Replicate 31.2346455303204


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_1311.p1 GENE.S_Transcript_1311~~S_Transcript_1311.p1 ORF type:5prime_partial len:286 (+),score=22.53,PIG-F|PF06699.7|6.3e-39 S_Transcript_1311:2-859(+)
CGGGGAGGAAGTACGAATTATTTTGCACCAAAAAAAAAAAAAAAAAAACTTGTGGGAGGATGCAACAGCCAACAACTCTATCCTCAAAAAAACCCTAGAAGACCCCTCGCCGGAGAAGACCACCTGCAGCACAAACTCCATCCACTTCGGTCTCCAGATAGAAGATCAGGTACTATTCATTTGCAAATTTCGGTTGATTGGTTTTGGAATGTGACGGTGATGTCATCAACATTTGGTGTTTTATCGTTGCATTTGTTATGTGGATTGGGTTTAGGGTCAGCTTTCTTAGTGGCCAATCATATCTACCATATCAATCTCATATCGGATCCTGAAACTATGCTGCTTATATCTTGGGTCATTGAGTGCCCAATTGTAACCCTACTTTATAGTCTTTTCAGGAAAAATCCAGCAAAATGCTCGTATTTGAAGGCGGTAGGACGGGGGCTATTGGGGCTTGTTGCAGGGGCGATGGTGATCGCACTAGGAGCTATTACCTTGGGTGCACCCGTTGGCACAAATTATCTGTGGAGGACACTATACTGGTCCCTTCTGATGTCATTGTTTACATTTGCACCTGCTGCATCCGTTTTCGGTTCATCTTGGGTAGATTGGCAACGTATATTTGCAGACACCAGGCCAGCTGGATGTGTTGATTATATGGTCTGTCTTCCCGCACATGGTGCCCTTATTGGGTCTTGGTTTGGAGCTTGGCCTATGCCACTTGATTGGGAGAGGCCATGGCAGGAATGGCTTATTTGTGTGACCTATGGAGCAATGGCTGGCTATGCGATTGGCATGGTAGCATCCCTCCTATTTCCACTTCACAATGGCAGGAGGCTGCATACAAAAGAAGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_1311.p1 GENE.S_Transcript_1311~~S_Transcript_1311.p1 ORF type:5prime_partial len:286 (+),score=22.53,PIG-F|PF06699.7|6.3e-39 S_Transcript_1311:2-859(+)
RGGSTNYFAPKKKKKKLVGGCNSQQLYPQKNPRRPLAGEDHLQHKLHPLRSPDRRSGTIHLQISVDWFWNVTVMSSTFGVLSLHLLCGLGLGSAFLVANHIYHINLISDPETMLLISWVIECPIVTLLYSLFRKNPAKCSYLKAVGRGLLGLVAGAMVIALGAITLGAPVGTNYLWRTLYWSLLMSLFTFAPAASVFGSSWVDWQRIFADTRPAGCVDYMVCLPAHGALIGSWFGAWPMPLDWERPWQEWLICVTYGAMAGYAIGMVASLLFPLHNGRRLHTKEE*

Click here to download the sequence:
Link to NCBI Protein BLAST