Transcript Information: S_Transcript_131178.p1


Annotated TAIR IDAT3G24520.1
Annotated Gene Nameheat shock transcription factor C1
Annotated Gene Symbol(s)AT-HSFC1, HSFC1
Annotation TypeOrtholog
Chromosome Positionchr3:8941455-8942531 | Forward length=330
E-Value1.4E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.546257385475
Replicate 29.938193494376
Replicate 38.2244633886327
Condition 2: 8 Hour
Replicate 16.9163428055567
Replicate 27.9611533447676
Replicate 310.273854476275
Condition 3: 24 Hour
Replicate 112.004845882218
Replicate 27.4525146174476
Replicate 35.7942534444186


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_131178.p1 GENE.S_Transcript_131178~~S_Transcript_131178.p1 ORF type:5prime_partial len:222 (-),score=33.22,HSF_DNA-bind|PF00447.13|7e-16 S_Transcript_131178:303-968(-)
AACAATTTCTCCAGCTTTGTTCGTCAGCTTAATACCTATGGATTCCGCAAAATAGTGCCGGACAAATGGGAATTCAGCAACGACAACTTCAGGAGAGGTGAAAAGGAGCTTCTAACAGAAATCCGGCGCCGGAAAGCCATAGCAGCATCTCCGAAACTCGCGGGCGGCAATGCGTCCACGGTGAGCTCCGGTGAAGAAGCGGGGTCAACGTCAATGTCATCACCGGAGTCGAAGAACCCGGGATCAACGTCAGTGGAAATAGCGGATTTATCAGGAGTGAACGAGAAGTTGAGAAAAGATAACGAGATGCTGAGCTCAGAACTAGCTCAAACAAAGAAGCAATGTGAAGAACTGATGACGTTGTTGACTGGGTGCTTGAAGGTGGGGCCCGATCAGATGAATCATATCCTACGGCAAGGAACAGGTGTTCATGCGTGTGGACCACCACTAGGTCAGAGTGATGGGGTTGTTGGTGATAGAGACACTTCTGATGATGACGACAACGACGAAAAAGAAGAAATAATAAAAGAAGAAGAAGAAGGATTGAAATTGTTTGGGGTATGGTTGAAACAGGGCAACAAAAGAGGACGCTGTTGTGACGGTGAAGATAATCTCGGCTTGTGTGGGACCCCCCAATGTGGCGCCAAAGTCATGAAAACCCGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_131178.p1 GENE.S_Transcript_131178~~S_Transcript_131178.p1 ORF type:5prime_partial len:222 (-),score=33.22,HSF_DNA-bind|PF00447.13|7e-16 S_Transcript_131178:303-968(-)
NNFSSFVRQLNTYGFRKIVPDKWEFSNDNFRRGEKELLTEIRRRKAIAASPKLAGGNASTVSSGEEAGSTSMSSPESKNPGSTSVEIADLSGVNEKLRKDNEMLSSELAQTKKQCEELMTLLTGCLKVGPDQMNHILRQGTGVHACGPPLGQSDGVVGDRDTSDDDDNDEKEEIIKEEEEGLKLFGVWLKQGNKRGRCCDGEDNLGLCGTPQCGAKVMKTR*

Click here to download the sequence:
Link to NCBI Protein BLAST