Transcript Information: S_Transcript_131410.p1


Annotated TAIR IDAT3G23290.2
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH4
Annotation TypeOrtholog
Chromosome Positionchr3:8326958-8328010 | Forward length=195
E-Value1.3E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3748310033124
Replicate 20.62148702978915
Replicate 30.64939211561974
Condition 2: 8 Hour
Replicate 10.4505364151507
Replicate 20
Replicate 30.45033480855594
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.71048012408778


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_131410.p1 GENE.S_Transcript_131410~~S_Transcript_131410.p1 ORF type:3prime_partial len:142 (+),score=3.58,DUF640|PF04852.8|5.2e-46 S_Transcript_131410:503-925(+)
ATGGATCTCATTTCAGCTAGTACTAATAATCACACTTCCTCAAACACCACCAACCACCACCATACAATCACTAATTGCTCTCCACCTCCTTCTTCCACTTTATCCTCAACCGCCAGTAGCGGCGTTTTTAGTGGTGGTGGTGGGAGTGGAGGACAGTTGAGTAGGTATGAGAACCAGAAGCGTCGAGACTGGAACACTTTCGGGCAGTACTTACGTAATCACCGCCCTCCGCTGACGTTAGCACGGTGTAGCGGGGCCCACGTGCTAGAATTCTTGAGATATCTAGACCAGTTCGGAAAGACCAAAGTCCACAACCCGCCTTGCCCCTTCTTCGGGCACCCCAACCCGCCTGCCCCCTGCCCGTGCCCGCTTCGGCAGGCTTGGGGCTCCCTTGATGCTCTCATAGGCCGCCTTCGGGCTGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_131410.p1 GENE.S_Transcript_131410~~S_Transcript_131410.p1 ORF type:3prime_partial len:142 (+),score=3.58,DUF640|PF04852.8|5.2e-46 S_Transcript_131410:503-925(+)
MDLISASTNNHTSSNTTNHHHTITNCSPPPSSTLSSTASSGVFSGGGGSGGQLSRYENQKRRDWNTFGQYLRNHRPPLTLARCSGAHVLEFLRYLDQFGKTKVHNPPCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAA

Click here to download the sequence:
Link to NCBI Protein BLAST