Transcript Information: S_Transcript_13146.p1


Annotated TAIR IDAT4G26700.1
Annotated Gene Namefimbrin 1
Annotated Gene Symbol(s)ATFIM1, FIM1
Annotation TypeOrtholog
Chromosome Positionchr4:13463760-13467426 | Forward length=687
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.843027236757
Replicate 223.385266709354
Replicate 325.129576067128
Condition 2: 8 Hour
Replicate 128.589741112297
Replicate 227.70315175124
Replicate 330.509085972627
Condition 3: 24 Hour
Replicate 118.715061002176
Replicate 224.883804815551
Replicate 322.087726021439


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_13146.p1 GENE.S_Transcript_13146~~S_Transcript_13146.p1 ORF type:complete len:684 (+),score=139.88,CH|PF00307.27|5.8e-15,CH|PF00307.27|4.4e-20,CH|PF00307.27|3.9e-15,CH|PF00307.27|2.9e-14,CAMSAP_CH|PF11971.4|1.2,CAMSAP_CH|PF11971.4|20,CAMSAP_CH|PF11971.4|0.023,CAMSAP_CH|PF11971.4|2.9e+02,CH_2|PF06294.7|1.1e+04,CH_2|PF06294.7|31,CH_2|PF06294.7|0.0051,CH_2|PF06294.7|3.3 S_Transcript_13146:574-2625(+)
ATGGCTGGTTATGCTGGTGTTGTGGTTTCTGATCCATTGCTTCAGAGCCAGTTCACTCAGGTTGAACTTAGAAGCCTCAAATCCAAATATACTGCTGTGAAGAATCAAAATGGTAAGGTTGCCGTTGCGGATTTGCCAGCAATTATGGCCAAGTTAAAGGGATTTAGCATGTTTAAAGAGGAAGATATTAGGACGTTTTTGAGTGGCTCTGTCTGCGATATGGACCAAGAGGTCGAATTCGAAGCTTTTCTAAAGGTTCATTTGAGCTTACAAGCTCGCGCAGCAGCGCATGCTGGTGGAGCAAAGAACTCTTCTGCCTTTCTCAAGGTGTCGACAACTACCCTTCTTCATACAATCAGCCAATCAGAGAAGGGATGCTATGTTCATCACATCAACACTTACCTTGGCGATGACCCTTTTCTGAAGCAGTTTCTTCCTGTTGACACAAATGGTGATGATATCTTCGACCTCGCTAAAGATGGAGTTTTGCTCTGTAAGCTTATAAATGTGGCTGTTCCGGGAACAATAGATGAACGAGCTATAAACACCAAAGTAGTACTCAATCCATGGGAGAGGAATGAAAACCACACCCTGTGCCTTAACTCTGCAAAAGCAATTGGATGCACTGTGGTTAACATAGGCCCACATGACTTGGTGGAAGGCAGGCCTCATTTGGTCCTTGGATTAATTTCCCAAATTATAAAGATCCAACTCCTTGCTGATCTCAACCTCAGGAAGACACCACAGCTTGTCGAATTGGCGGATGATGCCAATGACATTGAGGAGCTCATGGGTTTGTCCCCTGAGAAGGTCTTACTAAAATGGATGAATTACCATCTCCAGAAAGCTGGATACAAGAAAGTCCTTACAAATTTTTCATCAGATTTGAAGGATGGGGAGGCTTATGCTTACCTGCTTAATGTTCTTGCACCAGAACATTGTGACCCGGCCACATTAGACACAAAGGATCCGACTGACAGGGCAAATTTGGTACTCGACCATGCAGAAAGAATGGGCTGTAAAAGATACTTAGATCCTATGGACATTGTTGAAGGCTCATCAAATCTGAACCTTGCATTTATCGCTCAAATATTTAAGCAGAGGAATGGTTTGTCAATGGACGGCAAGAAGGTCTCTTTTGCAGAGATGATGCCAGATGATGTGCTTACATCTAGAGAGGAAAGGTGCTTCAGATTTTGGATGAATAGTCTTGGTACTGCTACATATGTCAACAATGTGTTTGAGGATGTTAGAAATGGATGGGTGCTTTTGGAAGTTCTAGATAAGGTCTCACCAGGTTCAGTTAATTGGAAGCATGCTACAAAACCCCCAATCAAAATGCCCTTCAGAAAAGTCGAGAATTGCAATCAAGTCATAAAGATAGGGAAACAGTTGAATTTTTCACTTGTAAATGTGGCTGGCAATGACATCGTACAAGGAAACAAGAAGTTAATAGTAGCATTTCTATGGCAGCTGATGAGATATAACATGCTCCAACTTTTGAAGAACTTGAGGTCTTTCTCCCATGGAAAGGAGATCTCTGATGCAGACATCTTGAATTGGGCAAATAGAAAGGTGAAAAGCTCAGGGAGAAGGTCTCGCATTGAGAGCTTCAAGGACAAGAGCTTGTCTACTGGTCTGTTCTTCCTTGAGCTTTTAAGTGCGGTGGAGCCTAGGGTCGTCAATTGGAACCTTGTCACCAAGGGTGAAAAAGATGACGAGAAGAGGTTGAATGCTACTTACATAATAAGTGTTGCAAGGAAGCTTGGTTGCTCCGTTTTCTTACTTCCCGATGATATCATGGAGGTAAACCAGAAGATGATCCTTACCTTGACCGCTAGTATCATGTACTGGTGCTTACGACAGGATGATTCAGAGTCCTCTTCCACTTCAGAGGCTGCCACCACCACAGACATATCTTCGTCTGCTCCCTCTGTCTATAGCGAGGACGAGAGCTCGATCTGTGGGGAGGTCTCTTCATTAAACATCGATGACACGGCCTCCGATTCGACTGCCTCCTCAGCTGTCGAGAACATCGAAGATGAACAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_13146.p1 GENE.S_Transcript_13146~~S_Transcript_13146.p1 ORF type:complete len:684 (+),score=139.88,CH|PF00307.27|5.8e-15,CH|PF00307.27|4.4e-20,CH|PF00307.27|3.9e-15,CH|PF00307.27|2.9e-14,CAMSAP_CH|PF11971.4|1.2,CAMSAP_CH|PF11971.4|20,CAMSAP_CH|PF11971.4|0.023,CAMSAP_CH|PF11971.4|2.9e+02,CH_2|PF06294.7|1.1e+04,CH_2|PF06294.7|31,CH_2|PF06294.7|0.0051,CH_2|PF06294.7|3.3 S_Transcript_13146:574-2625(+)
MAGYAGVVVSDPLLQSQFTQVELRSLKSKYTAVKNQNGKVAVADLPAIMAKLKGFSMFKEEDIRTFLSGSVCDMDQEVEFEAFLKVHLSLQARAAAHAGGAKNSSAFLKVSTTTLLHTISQSEKGCYVHHINTYLGDDPFLKQFLPVDTNGDDIFDLAKDGVLLCKLINVAVPGTIDERAINTKVVLNPWERNENHTLCLNSAKAIGCTVVNIGPHDLVEGRPHLVLGLISQIIKIQLLADLNLRKTPQLVELADDANDIEELMGLSPEKVLLKWMNYHLQKAGYKKVLTNFSSDLKDGEAYAYLLNVLAPEHCDPATLDTKDPTDRANLVLDHAERMGCKRYLDPMDIVEGSSNLNLAFIAQIFKQRNGLSMDGKKVSFAEMMPDDVLTSREERCFRFWMNSLGTATYVNNVFEDVRNGWVLLEVLDKVSPGSVNWKHATKPPIKMPFRKVENCNQVIKIGKQLNFSLVNVAGNDIVQGNKKLIVAFLWQLMRYNMLQLLKNLRSFSHGKEISDADILNWANRKVKSSGRRSRIESFKDKSLSTGLFFLELLSAVEPRVVNWNLVTKGEKDDEKRLNATYIISVARKLGCSVFLLPDDIMEVNQKMILTLTASIMYWCLRQDDSESSSTSEAATTTDISSSAPSVYSEDESSICGEVSSLNIDDTASDSTASSAVENIEDEQ*

Click here to download the sequence:
Link to NCBI Protein BLAST