Transcript Information: S_Transcript_131508.p1


Annotated TAIR IDAT3G56820.1
Annotated Gene Nameunknown protein; Has 34 Blast hits to 34 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21040061-21041711 | Reverse length=220
E-Value8.7E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7312002195876
Replicate 25.3931263362814
Replicate 32.868870057449
Condition 2: 8 Hour
Replicate 15.765753678336
Replicate 25.8001089065958
Replicate 35.9210687791615
Condition 3: 24 Hour
Replicate 12.9935581079703
Replicate 24.3648822295188
Replicate 36.6324635287527


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_131508.p1 GENE.S_Transcript_131508~~S_Transcript_131508.p1 ORF type:5prime_partial len:270 (+),score=39.32 S_Transcript_131508:2-811(+)
TCGAGTTCACTCATCTCAGCATCTGCGAGTTCTGTGCATGTCCCCTTGCCTATGTCAATCTTCCATAATCTGCAAGTGCATAACCATAACCAAATCTTCCAAAAAACTGTGAGAAAAGGAGATATATCCACCTACACAAAGATGGTAAACCCAAGAAGAAACTCATATGGTTATAACAACACCCAAAACCCTGAAAACCCATTTCAGAACCAATCCTTTCTTATCTCTACAGCCCTTAATTTGTTAAAAAAGCCTCAAGCTTTCCCTTTTCTTCTAACAATCTTCATTTTACTCACCTGGGTTTTTCTCAGATTTCAAAACCCCTCTCATTTATCTCCCCTTTCTAACACTCCACAAAGATTGAGCAGAGAAGATGACCTAAAAGCCAATTTAGTCAGGTTTCCCCCTTCTCAGTTGTCTAAGGACAAAAGGGGTTGGTTATTTAACCCTGTTACTGCTGCCCTTGATGCTGGTATTTCTGGTGGTGCAGTAACATGTGCTTCGGTTCACGTGGGTGAAATCCGGCCTGGAGGCATTAGGGGAAATCACAGGCACTATACTTGCAATGAGACATTTATCCTTTGGGGTGCTCGAATGAAATTTAGGTTGGAGACTAGTCAAGTTGATCAGGGATATGCTGAAGTAATAATTGATGAAGATGAGGTTGCTGTTGCAGCGAGCCCTAGTGGAACAGCCCATGCTTTGGTAAATGTAGATCCCATAAGGACTGCATTCCTTTTGGGATGTCAAGATGGCCTTGCTAACTACAACAGCTCCAGCACTTCATATAAGATCTGGAATGATCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_131508.p1 GENE.S_Transcript_131508~~S_Transcript_131508.p1 ORF type:5prime_partial len:270 (+),score=39.32 S_Transcript_131508:2-811(+)
SSSLISASASSVHVPLPMSIFHNLQVHNHNQIFQKTVRKGDISTYTKMVNPRRNSYGYNNTQNPENPFQNQSFLISTALNLLKKPQAFPFLLTIFILLTWVFLRFQNPSHLSPLSNTPQRLSREDDLKANLVRFPPSQLSKDKRGWLFNPVTAALDAGISGGAVTCASVHVGEIRPGGIRGNHRHYTCNETFILWGARMKFRLETSQVDQGYAEVIIDEDEVAVAASPSGTAHALVNVDPIRTAFLLGCQDGLANYNSSSTSYKIWNDL*

Click here to download the sequence:
Link to NCBI Protein BLAST