Transcript Information: S_Transcript_131607.p1


Annotated TAIR IDAT5G48240.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19559301-19561153 | Forward length=356
E-Value5.5E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.9350509562158
Replicate 28.4428003360887
Replicate 36.3251260936536
Condition 2: 8 Hour
Replicate 16.6978662728901
Replicate 25.6535357573316
Replicate 35.7714388822152
Condition 3: 24 Hour
Replicate 17.4919275509258
Replicate 26.4636863340485
Replicate 37.2843449545462


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_131607.p1 GENE.S_Transcript_131607~~S_Transcript_131607.p1 ORF type:internal len:277 (-),score=85.41,Rrp15p|PF07890.8|4e+02,Rrp15p|PF07890.8|1.4e-18 S_Transcript_131607:1-828(-)
TGCAATTTAATCCTTTTTAGGATTGAGGTGTTGGAAGTAGGTAGGTTGGAAAATATGGTGGAGGGAACATATGACGGGCCACGATCAGCTACAATGCTGAAGAAGAGGAAGAAAGGGGTTAAGAAATTCCGAGGAGGAGCTAAGAAAATGAAGGTTGTTCCTGGAACTGCTAAGAAGAATAAAGTTAACCCAAAAATGCAAAAATTGTTTCGTCGAAGGGCGAGGGAATATAATTCAGATGATGAGGATGAGGAGGAGACTATGCAAGAAGGTTCTGATGGAGAAATGGAGATGGAAGGGAATGATGGAATTAGAAGTGATGATGACGATATAGGGGAAGGAGGAAGTTCAGATGAAGAAGGCGGTAAAGTTAAAGCTCAACCCGGGGTTATGAAGTTTGTGGAAGGATGTAAAGCGTTTAGGGTGGCATTTCAATCGATCATGAAAACTCGTACTGATGATGAGACATTGGGTCCGGTATTGTCAGCAAAGAAGAAGCTTGTTGTGTCAAAGCTTGTTGAAGAAAAGGCTGAGAAAAAGGCTAAGGGGGAAGCAAAGAAGGAAAAGCACTTGATTGAGGAGAAGGGGCATGTAAAGCCTGAGAATTTCTTAAATGCACATGAGAAGTTTCTGATAGGCATCGCTACAAAAGGAGTGGTCAAGCTGTTTAATGCTGTCAATAAGGCTCAAAATGCGCAGAAAGGGTTGAATCCTTCAAGATTTAAAGACGCAAAAGCTTTGACAAAGCGTAGAAAAGAAGCCTTCCATTCAGAATTGAGTAGGACTTCAGCACCATCAGCTGATACTACAACAAAGGTTTGTTGTCCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_131607.p1 GENE.S_Transcript_131607~~S_Transcript_131607.p1 ORF type:internal len:277 (-),score=85.41,Rrp15p|PF07890.8|4e+02,Rrp15p|PF07890.8|1.4e-18 S_Transcript_131607:1-828(-)
CNLILFRIEVLEVGRLENMVEGTYDGPRSATMLKKRKKGVKKFRGGAKKMKVVPGTAKKNKVNPKMQKLFRRRAREYNSDDEDEEETMQEGSDGEMEMEGNDGIRSDDDDIGEGGSSDEEGGKVKAQPGVMKFVEGCKAFRVAFQSIMKTRTDDETLGPVLSAKKKLVVSKLVEEKAEKKAKGEAKKEKHLIEEKGHVKPENFLNAHEKFLIGIATKGVVKLFNAVNKAQNAQKGLNPSRFKDAKALTKRRKEAFHSELSRTSAPSADTTTKVCCP

Click here to download the sequence:
Link to NCBI Protein BLAST