Transcript Information: S_Transcript_131608.p1


Annotated TAIR IDAT5G48240.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19559301-19561153 | Forward length=356
E-Value2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.678296725773
Replicate 211.36281007254
Replicate 39.498404849923
Condition 2: 8 Hour
Replicate 113.454216208663
Replicate 212.77019686302
Replicate 312.533352454431
Condition 3: 24 Hour
Replicate 113.313190796843
Replicate 214.20135832681
Replicate 313.098143231841


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_131608.p1 GENE.S_Transcript_131608~~S_Transcript_131608.p1 ORF type:5prime_partial len:233 (-),score=73.53,Rrp15p|PF07890.8|2.7e+02,Rrp15p|PF07890.8|1.7e-07 S_Transcript_131608:109-807(-)
TGCAATTTAATCCTTTTTAGGATTGAGGTGTTGGAAGTAGGTAGGTTGGAAAATATGGTGGAGGGAACATATGACGGGCCACGATCAGCTACAATGCTGAAGAAGAGGAAGAAAGGGGTTAAGAAATTCCGAGGAGGAGCTAAGAAAATGAAGGTTGTTCCTGGAACTGCTAAGAAGAATAAAGTTAACCCAAAAATGCAAAAATTGTTTCGTCGAAGGGCGAGGGAATATAATTCAGATGATGAGGATGAGGAGGAGACTATGCAAGAAGGTTCTGATGGAGAAATGGAGATGGAAGGGAATGATGGAATTAGAAGTGATGATGACGATATAGGGGAAGGAGGAAGTTCAGATGAAGAAGGCGGTAAAGTTAAAGCTCAACCCGGGGTTATGAAGTTTGTGGAAGGATGTAAAGCGTTTAGGGTGGCATTTCAATCGATCATGAAAACTCGTACTGATGATGAGACATTGGGTCCGGTATTGTCAGCAAAGAAGAAGCTTGTTGTGTCAAAGCTTGTTGAAGAAAAGGCTGAGAAAAAGGCTAAGGGGGAAGCAAAGAGGGAAAAGCACTTGATTGAGGAGCAGGGGAATGTAAAGCTTGAGAATTTCTTAAATTCACATGAGAAGTTTCTGATAGGCATCGCTACAAAAGGAGGTTCACCACAACCAGTGTCTCCATTCTCTTACTTTCCCTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_131608.p1 GENE.S_Transcript_131608~~S_Transcript_131608.p1 ORF type:5prime_partial len:233 (-),score=73.53,Rrp15p|PF07890.8|2.7e+02,Rrp15p|PF07890.8|1.7e-07 S_Transcript_131608:109-807(-)
CNLILFRIEVLEVGRLENMVEGTYDGPRSATMLKKRKKGVKKFRGGAKKMKVVPGTAKKNKVNPKMQKLFRRRAREYNSDDEDEEETMQEGSDGEMEMEGNDGIRSDDDDIGEGGSSDEEGGKVKAQPGVMKFVEGCKAFRVAFQSIMKTRTDDETLGPVLSAKKKLVVSKLVEEKAEKKAKGEAKREKHLIEEQGNVKLENFLNSHEKFLIGIATKGGSPQPVSPFSYFPC*

Click here to download the sequence:
Link to NCBI Protein BLAST