Transcript Information: S_Transcript_131679.p1


Annotated TAIR IDAT1G08540.1
Annotated Gene NameRNApolymerase sigma subunit 2
Annotated Gene Symbol(s)SIGB, SIG1, SIG2, SIGA, ATSIG1, ABC1, ATSIG2
Annotation TypeOrtholog
Chromosome Positionchr1:2703461-2706696 | Forward length=572
E-Value1E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.798317523899
Replicate 224.539225120093
Replicate 330.298780708772
Condition 2: 8 Hour
Replicate 122.631026458998
Replicate 223.513269488692
Replicate 326.971072479772
Condition 3: 24 Hour
Replicate 118.055464925899
Replicate 225.207708794101
Replicate 318.787849403811


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_131679.p1 GENE.S_Transcript_131679~~S_Transcript_131679.p1 ORF type:5prime_partial len:98 (-),score=19.77,Sigma70_r4|PF04545.12|1.3e-18 S_Transcript_131679:153-446(-)
CTTAAACCCTCGGAAGTGATTGCAGACCCTGAAGCAGAAACTGCTGAAGACTTACTGACCAAGCAGTTCATGAAGCAGGATCTCGAGAAGGTGCTGGATACACTCGGTTTGAGGGAGAAGCAGGTCATAAGATGGAGATTCGGACTAGAAGATGGAAGAATGAAAACGTTACAGGAGATTGGCGAGCTGATGGGCGTCAGCCGGGAAAGAATTAGGCAAATTGAGTCATCTGCCTTCAGGAAGCTGCAAAGTAAGAAGAGAACCCAACATTTGGAACAATACTTGTTCTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_131679.p1 GENE.S_Transcript_131679~~S_Transcript_131679.p1 ORF type:5prime_partial len:98 (-),score=19.77,Sigma70_r4|PF04545.12|1.3e-18 S_Transcript_131679:153-446(-)
LKPSEVIADPEAETAEDLLTKQFMKQDLEKVLDTLGLREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQSKKRTQHLEQYLFS*

Click here to download the sequence:
Link to NCBI Protein BLAST