Transcript Information: S_Transcript_131730.p1


Annotated TAIR IDAT1G53460.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19954558-19956509 | Reverse length=314
E-Value2.6E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6141112788517
Replicate 23.4047514749251
Replicate 34.439917946052
Condition 2: 8 Hour
Replicate 14.6731565201125
Replicate 24.9024730043845
Replicate 34.6052757171256
Condition 3: 24 Hour
Replicate 13.3711239954621
Replicate 23.7773019293912
Replicate 33.4252159068676


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_131730.p1 GENE.S_Transcript_131730~~S_Transcript_131730.p1 ORF type:complete len:324 (+),score=68.26 S_Transcript_131730:257-1228(+)
ATGTTCACCATTAAAGTCCTGCTTTCCCATTCTTCTTTCCGTACTCTAAAACCTCCATTAAACCCTCACAAATTCCCCAGAATCCCAAACCATGCACATAAACAGAGACCCGTTTCTGTTTCAGCACAATTAGAAACCCCAACAAAAGTCAAGAAGAAGAATAACAACAGACCATTGGATGCCCTTTTCAAGGAAGCACTGGGGTTATGTGAAAGGACTGAGATTTTAGGAACTCAGAGTGAGAATAAGAGTGATGATGAGGATGGAGAGCTAAAGAGCAAGTTATGGGATTTGGAAATGGAGTTAAGGCAATTGAAGGTAGAAACATCAGAAGAAAAGGAGAGAAAATTTGGTGGGTCTCAGTCTAAGTTTAAGCATAAAAGCTTGCTTACCCATATTACCAATACAGGTGGGGAGAAAGAAAATTCATTGGATAAGAGAGAAGATGTAGTCTTGAAAGAGATGTCACCTGATATGCAAGTGTTGTTAAGGCATTTATATGATAGAGGGTACTTCAAAAATGTTAATTTTTTGCCTGGTAATGCATTTGATGTTAGTTATTTTGACAATGCCTATGCCCGTGATTTTTTAAAGTGTACTGTGGAGAGGTTTGGGGAAGATAATCAAGAAATTACCAAGTGGCTCTCAGGCAGTGATTTGAAAACAATTGCGCTGTTTGGTTGTCCTTCCCAGAGAAAGAGGGAGGTCTTTGCTGCCAAAAGGCTACGTATGTTTTTCGAGATACCAGAAGAAACTGTTTGTGGTAAATGCACCTTGAAAGAGTCTTGCAAATTTGTGAACCAGTGTGTGTGGAATGCTAACTCCAAGATGTTGAGATTGGACTTGTTGATGAGGCTCCTCAGTACATACTCCCAGGAGGATATTCCTCGTCAACTCAAGCTGACAGACGATGTTAAGGCTCGTGTCAGTCGATTGATGCATGACGTTATGAACTTGAGTAAAAGCACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_131730.p1 GENE.S_Transcript_131730~~S_Transcript_131730.p1 ORF type:complete len:324 (+),score=68.26 S_Transcript_131730:257-1228(+)
MFTIKVLLSHSSFRTLKPPLNPHKFPRIPNHAHKQRPVSVSAQLETPTKVKKKNNNRPLDALFKEALGLCERTEILGTQSENKSDDEDGELKSKLWDLEMELRQLKVETSEEKERKFGGSQSKFKHKSLLTHITNTGGEKENSLDKREDVVLKEMSPDMQVLLRHLYDRGYFKNVNFLPGNAFDVSYFDNAYARDFLKCTVERFGEDNQEITKWLSGSDLKTIALFGCPSQRKREVFAAKRLRMFFEIPEETVCGKCTLKESCKFVNQCVWNANSKMLRLDLLMRLLSTYSQEDIPRQLKLTDDVKARVSRLMHDVMNLSKST*

Click here to download the sequence:
Link to NCBI Protein BLAST