Transcript Information: S_Transcript_131878.p1


Annotated TAIR IDAT3G53670.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37480.1); Has 176 Blast hits to 173 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 13; Plants - 154; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19891104-19892214 | Forward length=203
E-Value2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.613001235181
Replicate 221.843259313161
Replicate 325.966638366463
Condition 2: 8 Hour
Replicate 139.680079495561
Replicate 236.395992563137
Replicate 335.31431468885
Condition 3: 24 Hour
Replicate 124.670589812761
Replicate 223.565853828142
Replicate 320.955628933604


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_131878.p1 GENE.S_Transcript_131878~~S_Transcript_131878.p1 ORF type:5prime_partial len:201 (-),score=39.90 S_Transcript_131878:324-926(-)
GAAAAGATAACGGGTGATTGTGACATAAATTTGGATGGATCTGTAGAAAACTCCAGCAAGTGCTTACAGAAGTGCGCTACTTTTCCTGTTACTGTAAGCGCAGAGAAGACGCCTGACACGCAGTCGGAAAACAATTCTTATGCACGCTCATTTTCTTTGCCTACCACGGGCAAGCTGGTGTCTGCGATGAAGGGTGGGCGTGAGAAGGAGGGGATGCCTTTAAGGAAGCTGAGTGTTTCTTGGGCGCCTGATGTGTACGATCCACCTCCGACCTCACTGTCTCATTACCCGAAGAAGAAGGTGCAGCAGCATTATAAGAACAACAAGAAACACGGCAAAGGAAAGCAGAAGGCCAAGAACATGCGTGGGGGAGGAACTTGCCCGAAGGAAAAGAAGCATCATCGCAAGATCGGAGGGAAGTCCGAACGGTGTTTAGATTCTTTTGCAGGTACTGACAGGGTAATGCCATCAAACAAGTGCAGCTCTTCTGTTGATCTTCTGGGTTTTGATGATGATATTGGTGGCCCTGAATCCAACTGTGGGAGTAGCTTTCGGGGAAAAGCTGCTAATGCCATGCACTACGCATATGCTGAAGCTACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_131878.p1 GENE.S_Transcript_131878~~S_Transcript_131878.p1 ORF type:5prime_partial len:201 (-),score=39.90 S_Transcript_131878:324-926(-)
EKITGDCDINLDGSVENSSKCLQKCATFPVTVSAEKTPDTQSENNSYARSFSLPTTGKLVSAMKGGREKEGMPLRKLSVSWAPDVYDPPPTSLSHYPKKKVQQHYKNNKKHGKGKQKAKNMRGGGTCPKEKKHHRKIGGKSERCLDSFAGTDRVMPSNKCSSSVDLLGFDDDIGGPESNCGSSFRGKAANAMHYAYAEAT*

Click here to download the sequence:
Link to NCBI Protein BLAST