Transcript Information: S_Transcript_131953.p3


Annotated TAIR IDAT5G04050.2
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1096092-1098512 | Forward length=695
E-Value2.7E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43390762883446
Replicate 21.4388775798379
Replicate 31.5034839198587
Condition 2: 8 Hour
Replicate 11.3907863250304
Replicate 21.4590336069387
Replicate 31.2743169763847
Condition 3: 24 Hour
Replicate 11.1872219288366
Replicate 20.9853831120151
Replicate 30.13707632828867


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_131953.p3 GENE.S_Transcript_131953~~S_Transcript_131953.p3 ORF type:complete len:184 (+),score=42.91 S_Transcript_131953:1353-1904(+)
ATGAATATATACTTGAATGGATTTGATAAGAAGTTACAAAAGATTCGCCTTCGGATGAATGAGGAGAATCCTAAGGTTGATGATGTGAGTAGTGTTGTTGTGTATAAGCCTGTGAAGGTGTATGCTGTAAGGTACTTGGACGAGGTGCTGGTGATCACGTCTGGATCAAAGGTTTTAGCAGTGGATTTGTTGAATTGGGTCGTGAAGTACTTGGAGAATGAATTGTATTTGAAGGTGGATAGGTTAAGGACATCGATTCATAGTGCTGTTTCAGAGAAGATTGGTTTTTTGGGGATGGAACTTCAGGCTGTCCCGCCATCAGTCTTGAGGCCTCCCCTTTCAGAGAAAGCAATAAGGGCGAGGAAGAAGTACCGTAGGCAAAAGCAAGTTAGGTTATTGGAGTTGAGAAATGCGAAGGAGAGGAATCGGAGGAAGTTGGGGATGAAACTATTTAGTCATGTTTTTAAGAAGATCAAACAGAGTGGTGGGTTTTTAAGAAGATCAAACAGAGTGGTGGGTTCAAGTGTGATTACCAGATTGAAGATGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_131953.p3 GENE.S_Transcript_131953~~S_Transcript_131953.p3 ORF type:complete len:184 (+),score=42.91 S_Transcript_131953:1353-1904(+)
MNIYLNGFDKKLQKIRLRMNEENPKVDDVSSVVVYKPVKVYAVRYLDEVLVITSGSKVLAVDLLNWVVKYLENELYLKVDRLRTSIHSAVSEKIGFLGMELQAVPPSVLRPPLSEKAIRARKKYRRQKQVRLLELRNAKERNRRKLGMKLFSHVFKKIKQSGGFLRRSNRVVGSSVITRLKMK*

Click here to download the sequence:
Link to NCBI Protein BLAST