Transcript Information: S_Transcript_131999.p1


Annotated TAIR IDAT5G58020.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF602 (InterPro:IPR006735); Has 385 Blast hits to 385 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23485585-23486649 | Forward length=354
E-Value2.8E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.236868756935
Replicate 29.2895956031641
Replicate 33.235567733965
Condition 2: 8 Hour
Replicate 18.4179172304472
Replicate 24.3173742988946
Replicate 35.9833958189421
Condition 3: 24 Hour
Replicate 18.0481149702189
Replicate 27.9522145881921
Replicate 33.3186900533048


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_131999.p1 GENE.S_Transcript_131999~~S_Transcript_131999.p1 ORF type:5prime_partial len:114 (-),score=39.50 S_Transcript_131999:74-415(-)
CAGCTCAAGCTCAAGGCTAATAATAATAAGAAGCCCAAGAAGGTCAAGCCACACAACAGTGGTGGAGTAGATGGTGTCAACTTGGATTGTTCATCTCGGTTGACTGGCAAGAAGCATCATATCAATGTTAATGGGGTGGAGAAGCCTGCTGCCAAGCTCCAACCGGAACCTAATGGGAAGCCCACTGCTGATGCTCCTGCTTCTGCTAAGCGTTTTAAAGCAGTGGATAATGCCCCTCTTAATGCTAATAAGAAAGTCTATGCTTCTATTTTCACTTCTTCAAAGAAATCTGATTTCAAGGAGACCTTTACTTGCAGATCTCTACCTTTGGGTCGCAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_131999.p1 GENE.S_Transcript_131999~~S_Transcript_131999.p1 ORF type:5prime_partial len:114 (-),score=39.50 S_Transcript_131999:74-415(-)
QLKLKANNNKKPKKVKPHNSGGVDGVNLDCSSRLTGKKHHINVNGVEKPAAKLQPEPNGKPTADAPASAKRFKAVDNAPLNANKKVYASIFTSSKKSDFKETFTCRSLPLGRN*

Click here to download the sequence:
Link to NCBI Protein BLAST